Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390625
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Entry
139390625 CDS
T10872
Name
(RefSeq) AF4/FMR2 family member 2-like
KO
K15194
AF4/FMR2 family member 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocla03021
]
139390625
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
139390625
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
139390625
NCBI-ProteinID:
XP_070993976
LinkDB
All DBs
Position
31:20247501..20522111
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AA seq
1350 aa
AA seq
DB search
MDLFEFDFFRDWELEQQCHYEQDRNALKKREWERRTQEVQQDEDLFSSGFNLFGEPYKTE
APSLSTLGGTNNLNKTNKGDALANRVQNTLGNYDEMKELLTSHSNQSHLVGIPKNFVPQT
PGPMEKQDQPSFLTKGGQRGSNRVGTGNHTTSMPPPPSSSSLTSSSLLHGHQSSKKSWSS
DWSRGAHCSTQGVEGQGVGGQGVHGVGGLGVQGVGGPSCSRGKHSFTHEQQQQPQRHEEL
LISQGEVVDHRGDSSSSPSSSSTSTLSRRHGGGQLQAPKAPSSAEHGSYKDSNTHVKSPL
EQEPGSHGASSPVASTSLLPSGLSTPTFPQGLHGKPSAVQQQKPTAYVRPMDGQDQMPLD
SPELKPPLEVVDVGYSNPAFGSTITSSKSKLPKLTLTQTGEVGLSSDSSCVEEILREMTH
SWPPPLTAIHTPGKAEQTRFPIPSKESQHIPSGCAGLKRCNVPVNKPATKSVPQKSMLED
DLKISSDEEDTEQQAAEKPKPRSTPLSIPVATSRTSDPGHSSGASASSSESESSSESDSD
SESSSSDSECNGASRTATPEPEPPSTNKWQLDKWLNKVTPHNKALISTQSERESHGLCSS
QPDHSQQAPGSQDLAPGKSKPGPTVLLAQTDAKERALLSPIREKAKPKTGPKVSEGKSSK
SPAAVVVEPAPARRSIGKKQPKKVEHSSSLEEHSSWSKPINPSISTTPKEKEPPPLLEPP
KSRTKGTSGKAAPRKEPRTTTTTTTTPAHPPPAPVLDKKKHRGPSRILPKSKEFIETESS
SSECHSEPEDLIKVPNPPCPGPSSLQTLKAANILSVSSLTSTCSTSISIPDPGVVGGLLE
DPLLSPVPIVQNELLSPLRDFEDIKSLWVKIELSFLSRIPGQDPPEPPPVKVEPQEHWEP
STKHRRQSPASQQSTPVEKPPSKAKRKHKSDHCNAVGGSKKLRLEKDSMLLPPCISPIHN
HKNISTKDSLRKQPRKRELLPPLLSPLSDEPPTRQRRTSECSSFSQEGGASGALLLPTLS
CSLPPFSSSSSSSSSHKHHSKGESKFFSHSKTSSEEDTHSKPSGSFHGNGQSDSDLWSNP
SSLSMDHMEPRRPKLTFNNKVHTADYYMQEAKKLKHKADALMEKYGKAVNYADGALSFIE
CGNAMERDPLEAKSPYTMYSETVELIRYAMRLKNFTSHSATVAEKKLAVLCNRCLSLLYL
RMFKLKKDHAVKYSRSLMEYFKNSAKSSQVPSPWGANGKNTGTPSPLSLSLSPVSWGSSS
TGTAGSGASGNVAIPQRIHQMAASHVNITNNILRSYEHWDTAEKLATESQEFFQELDSMM
EPLSQHSSMIELVHYIRQGLHWLRIEAHLL
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atggacctattcgagtttgacttctttagggactgggaactggagcaacagtgtcattat
gagcaggaccgcaatgcgctcaagaagagggagtgggagcggcggactcaggaggtgcag
caggacgaagatctcttctcctctgggtttaatctctttggggagccatacaagacagaa
gctcccagtctatccactttgggggggaccaacaacctaaacaagacaaacaaaggtgac
gccctggccaaccgggtgcagaacaccctggggaactacgatgagatgaaggagctcctg
accagccactccaaccagagccacctggtgggcatccccaagaactttgttccccagacc
cctggccccatggagaagcaagaccagcccagcttcttaaccaagggaggccagaggggg
agcaacagggtgggcacagggaaccatacaacctccatgccccctcctccctcctcttct
tctctgaccagctccagcctgctgcacggccatcagagctccaagaagtcctggtcctcc
gactggtcccggggagcccactgcagcacccagggggtggaaggtcagggggttgggggc
cagggggtccatggggtggggggcctgggggtccagggggtggggggcccatcctgcagc
agggggaaacactccttcacccatgagcagcagcagcagccccaaagacacgaggagctg
ctcatctcacagggcgaggtagtggaccacaggggagactccagcagcagcccctcctcc
tcctccacctccactctctccaggaggcacgggggcgggcagctgcaggcccctaaggcc
ccgtcatcggccgagcatggcagctacaaggacagcaacactcatgttaagtctcccctg
gagcaggagccgggctcccacggggccagttccccagtggcctctacctccctgctgccc
agtggcctctccacgcccaccttcccgcagggtctgcacggcaagcccagcgccgtgcag
cagcagaagcctacggcctacgtgcggcccatggacggccaggaccagatgcccctggac
tccccggagctcaagcctcctctggaggtggtggatgtgggctacagcaacccagctttt
ggtagcaccatcaccagctccaagagcaagctgcccaagctgaccctgacacagactggg
gaggtcggcctgtccagtgactccagctgtgtggaggagattctacgggagatgacccac
tcctggcctcctcccctgactgccatccacactccaggcaaggctgagcaaacccggttc
cctattccctccaaggagtcacaacacataccctcaggatgcgctggactaaagcggtgc
aatgttcccgttaacaagcctgcaaccaagtctgtgccacagaagtcaatgcttgaggat
gacctgaagatcagcagtgacgaggaagatactgaacagcaggcagctgagaagcccaag
cccagaagtacacctctcagcatccctgtggccacgtctcggaccagtgacccgggccac
tctagtggcgcctcggccagctccagtgaatcagagagcagctccgagtcggattcagac
agtgagagcagctccagtgacagcgagtgtaacggggcctcccggaccgccaccccagag
cctgaacctccatcaacaaacaaatggcagctggataagtggctgaacaaagtgacccca
cacaataaagcacttatcagtacccagtcagagagagagagccatgggctctgcagctcc
cagcctgaccacagccagcaggcacctgggagccaggacctggccccaggaaagagcaag
cctgggcccaccgtcctgctggcccagaccgacgccaaggaacgggccctcctcagcccc
atccgagagaaggccaagcccaagactggaccaaaggtctcagagggcaagagttcaaag
tccccagcagcggtggtggtggagccggccccagccagacgcagcattggaaagaagcag
ccaaagaaagtggagcactcatccagcctggaagaacacagctcctggtccaagcccatc
aacccctccatcagcactacccctaaggagaaggagcctccgcctcttctggagccgccc
aagtccaggaccaagggcaccagtgggaaagctgcccctaggaaggaacctcgcaccacc
actaccacgactactactccagctcatcctcccccagccccagtcctggacaagaagaag
cacagggggcccagcaggatcctccccaagtccaaggagttcatcgagacggagtcttcg
tcgtctgagtgccactctgaaccagaggatctgatcaaggtccctaaccctccctgccca
ggtcccagcagcctgcagactctcaaagcagccaatatcctgagtgtcagtagccttacc
agcacctgcagcacttccatctctatcccagaccctggtgtggttgggggcttactggaa
gaccccctcttgtcccctgtccccatcgtccagaacgaacttttgtcccctctcagggac
tttgaggacatcaaatcactgtgggtgaagatcgagctgagcttcctgtctagaatccca
ggacaggacccccctgagccccctcctgtgaaggttgagccccaggaacactgggaaccc
agcaccaagcacagacgccagtcccccgccagtcaacagtctacccctgttgagaaaccc
cctagcaaggccaagaggaaacacaagtcggaccattgtaacgctgtcggcgggagcaag
aagttacggttggagaaagactccatgcttcttcccccgtgcatctcacccattcacaac
cacaagaacattagcacaaaagactctctgaggaaacagcccaggaagagagagctgctg
cctcccctgctgtcgccgctctctgacgagcctcccacccgccagcgcaggaccagcgag
tgttcctccttcagccaggagggcggcgctagcggcgccttattactacccaccctcagc
tgctctctgccccccttctcctcctcctcatcctcctcttcctcacacaagcaccacagc
aaaggagagagcaaattcttctcacattccaagacaagcagtgaggaagatacccacagc
aaaccatctggcagtttccatggtaacggtcagtctgattccgacctttggtccaacccc
tcatctctgtccatggaccacatggagccaagaagaccgaagctaacgttcaataacaaa
gttcacactgcagactactacatgcaggaagccaagaaactgaagcacaaagcagatgca
ctgatggagaagtatggcaaagctgttaactacgctgatggggcgctgtcgttcatagaa
tgtggcaacgccatggaacgggacccactggaggccaagtctccatacactatgtactct
gagacagttgaactcatcagatatgccatgaggttaaagaactttacaagtcactcagca
acagtagccgagaagaaattagctgtattgtgcaatcgctgtttatccctcctgtacttg
agaatgttcaaactaaagaaggaccatgcagtaaagtattcccgttctctgatggagtat
ttcaagaactcggctaaaagttcccaagtaccttcgccatggggagccaatggaaagaac
acaggcaccccatcgcccctgtctctgagtctctccccagtcagttggggcagcagcagt
acgggcactgcgggctccggggcctccggcaacgtggccatcccccagcgcattcaccag
atggccgccagccacgtcaacattaccaacaacattctccggagctacgagcactgggac
acagcagaaaagttggccacagagagccaagagttctttcaggagctggactcaatgatg
gaaccgttgagccaacacagcagcatgatagaacttgtgcactacatacgtcaaggactg
cactggctacggatagaggcccacttgttatag
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