Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390627
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Entry
139390627 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase RNF103
KO
K15695
E3 ubiquitin-protein ligase RNF103 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139390627
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139390627
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139390627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
Thioredoxin_6
zf-ANAPC11
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
139390627
NCBI-ProteinID:
XP_070993978
LinkDB
All DBs
Position
31:18537584..18542316
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AA seq
670 aa
AA seq
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MWLKLFFLLLYFMVLFVLARFFEAVVWYESGLFATQLVDPVTLSFNKLKTILECRGLGYS
GLAEKRDVRELVEKSGDLMQGELYSAIKNEKEQAESQSESSTTFSGEMHFYELVEDTKDG
IWLVQVIAQDRDALLSKANWGKMVQKVSQFGIRTGTFNCSSDSRYCRKRGWMKSTLIMSV
PQTYASKGKVMLKEYNGRRIETEHIFKWMTAHVASRIKTIRMSQQLVEEWHPSEKHPVKM
FLFAKLAQPPAFFSALSVKFTGRIEFIFVDVQSWDNITSLEEIGVQQLPSYILKMPEGIY
RYGNSIGEFISLQAMDTFLRSVQPEVNDLFVLSLVMVNLMAWLDLFITQGATIKRFVVLI
STLGTYNSLLIISWLPILGFLQLPYLEGFYDYSLKLLRYADTTTIASWVRTDWTFYSSHP
ALFLSTYLAHGLLIDYFEKKRRCNNEEENPNNLEWLSSLWDWYTSYLVHPITSFHNFPNE
SDWDDDPNFLLERLAFPDLWLHPLIPIDYINNLPTWRFKCTQVCGPNSEENSGRDLDSNI
QNTTGGQTQGLNSEHEEHGCGKERDCAADSCCHSENGGDVPCMKREAQEQQADWSQWPSD
MIHCTECVVCLENFETDCIVMGLPCAHVFHQQCIVVWLAGGQHCCPVCRGPSYKRKPVRS
SGLDLLEQQE
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtggttaaaactattttttctcctactgtattttatggtgttattcgttttagccaga
ttttttgaagcagttgtctggtatgaaagtggtctttttgccacccagttggttgatcct
gtaaccctgagtttcaataagttaaagaccattctagaatgtcgaggactgggatactct
gggcttgcagagaagagggatgtcagagaactagtcgaaaagtcaggtgacctgatgcaa
ggggagttgtactctgccatcaagaatgaaaaggagcaagctgagtcccagtctgagtcc
agcactaccttcagtggggagatgcacttttatgagctggtggaggacaccaaagatggc
atttggttggtccaggtaattgcccaagatcgagatgctcttttgagcaaagccaactgg
ggtaaaatggtccaaaaggtttctcagtttggcattcgcactggtacttttaactgctcc
agtgactcaaggtattgtcgtaaacggggttggatgaaatccacacttataatgtctgtg
cctcagacttatgcttcaaaaggaaaggttatgctgaaagagtacaatggcagacgcatt
gagacagagcacatcttcaagtggatgacggcacacgtagcgtcccgtataaaaaccatc
cgcatgtctcagcagcttgttgaagagtggcaccccagtgagaagcacccagtaaagatg
ttcctatttgccaagctggcacaacctccagcctttttttcagcactcagtgtcaagttc
acaggtcggatcgagttcatctttgtagatgtgcagagctgggacaatataacctccttg
gaagagataggtgtgcaacagttgccatcgtacatcctgaaaatgccggagggcatctac
agatatgggaacagcattggagagttcatctccctacaggccatggacactttcctccgt
tctgttcagccagaggtcaatgacctgtttgtgttgagtctagtgatggtcaacctcatg
gcctggttggacctgttcataacacagggcgccaccatcaagcgcttcgtggttctcatc
agtacgctggggacctacaactccctgctcatcatctcctggctgcctatcctggggttc
cttcagttgccatatctggagggcttctacgactacagcctcaagctgttgcgttacgca
gacaccaccaccatcgcctcctgggtgaggaccgactggaccttctactcctcccacccc
gccctgttcctcagcacctacctggcacacgggcttctcatcgactactttgagaagaag
aggcgatgcaacaatgaagaagagaaccccaataacttggagtggctgtccagcctctgg
gattggtacaccagctacttggtccatcccataacctcatttcataacttccccaacgag
tctgactgggacgatgaccccaatttccttctggagaggttggcctttcccgatctctgg
cttcacccgcttatccccattgactacatcaacaacctgcccacctggaggttcaagtgc
acacaggtctgtgggccaaactctgaagagaacagcggcagagatctggacagcaacata
caaaacactacaggaggacagacccaaggcttaaacagtgagcatgaagaacatggctgt
ggtaaagagagagattgtgccgctgattcgtgttgtcattctgaaaatggaggggatgta
ccatgcatgaaaagggaagcacaagagcaacaagcggattggtcccaatggcccagtgac
atgatacactgcacagagtgtgttgtgtgtctggagaactttgagactgattgcattgtc
atgggactgccctgtgcccacgtgttccaccagcaatgcattgtggtctggctggcaggt
ggacagcactgttgcccggtgtgcagggggccatcctacaaaaggaagccagttagatca
tctggtctggacctactggagcagcaggaatag
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