Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390639
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Entry
139390639 CDS
T10872
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00061
Fatty acid biosynthesis
ocla00071
Fatty acid degradation
ocla01100
Metabolic pathways
ocla01212
Fatty acid metabolism
ocla03320
PPAR signaling pathway
ocla04146
Peroxisome
ocla04216
Ferroptosis
ocla04920
Adipocytokine signaling pathway
Module
ocla_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
139390639
00071 Fatty acid degradation
139390639
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
139390639
09143 Cell growth and death
04216 Ferroptosis
139390639
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
139390639
03320 PPAR signaling pathway
139390639
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ocla01004
]
139390639
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139390639
Enzymes [BR:
ocla01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
139390639
Lipid biosynthesis proteins [BR:
ocla01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
139390639
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of breast milk
139390639
Exosomal proteins of breast cancer cells
139390639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
139390639
NCBI-ProteinID:
XP_070993998
LinkDB
All DBs
Position
31:complement(18349362..18373429)
Genome browser
AA seq
719 aa
AA seq
DB search
MVNITTLARCKDRQTDASKGPTMQAQQLLNQLRFPELDEVRQYLRSLSTHTLVGVGAFAA
LTTYWYTTRPKALKPPCDLKMQSVEVPGGEYARRSALLDSDKHMTHLYNDAKTMYEFFLR
GARVSNNGPCLGARQPSQSYEWLSYSEVAEKAENLGSALLHRGHTKTKDQFIGIFAQNRP
EWTIAELACYTFSLVAVPLYDTLGTEAIAYVIDKANISSILCDVPEKARLVLECVSGREH
SVRTIILMEPFDDELVAKGKDCGIDILSLSQVEAIGKAHHHQPVPPSPEDMAVVCFTSGT
TGNPKGAMLTHGNVASNCSAFIKVIEDHLILDHHDVHISYLPLAHMFERVVEGVILVHGG
RIGFFQGDIRLLMDDLTTLRPTVFPVVPRLLNRMFDKIYGQANTSLKRWVLDFAFKRKEA
ELLSGIIRRDSIWDKLIFRKVQASLGGRVRLMITGAAPVSATVLTFLRAALGCQLYEGYG
QTECTAGCTMTVPGDWTAGHVGAPLPCNSVKLVDVAEMNYLAANGEGEVCVKGANVFLGY
LKDPEKTEETIDANGWVHTGDIGKWLPNGTLRIVDRKKHIFKLAQGEYIAPEKIENIYTR
SDAVAQVFVHGDSLQACLVAIIVPDPDFLPGWAKKRGLEGSYGDLCNNMDVKKAILEDIL
KLGIDSGLKSFEQVKDITLFTEMFSIQNGLLTPTLKAKRSELRNYFREQIDKLYSKIKM
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggtcaatatcacaacgctggcgcgctgcaaagacagacagacagacgctagcaaaggc
ccaaccatgcaagcccagcagctcctgaatcagctgcgcttccccgagctggatgaggtg
cggcagtacctgcgcagcctgtccacacacacgttggtgggtgtgggggcatttgctgct
ctcacaacctactggtacaccacccggcccaaggccctgaagccaccatgcgacctgaaa
atgcagtccgtcgaggttccgggaggagagtatgcccgtcggtcagcgctgttggacagc
gacaaacacatgacccacctatacaacgacgccaagaccatgtatgagttcttcctcagg
ggcgcacgggtctccaacaatggtccctgtcttggagcaagacaaccaagccagtcctat
gagtggctgtcatactccgaggtagcagagaaggcagagaacctgggctcagcgctgctc
cacaggggacacactaaaaccaaagaccagttcattggcatcttcgctcagaaccgacca
gagtggaccatcgctgagctggcctgctataccttctccctggtggctgtgcccctgtat
gacactctgggcactgaggccatcgcctatgtcatcgacaaggccaacatttccagcata
ctgtgtgacgtccctgagaaggccaggctggtcctggagtgcgtctctggcagggagcac
agtgtcagaaccatcatcctcatggagccctttgatgatgagctggtggccaaggggaag
gactgtggcatcgacattctcagcctgagccaagtggaggctatcggcaaggcccaccac
caccaaccagttcctcccagtcctgaagacatggctgttgtctgcttcaccagtggaacc
acagggaacccaaagggagccatgctgacacatgggaatgttgcttccaactgctctgcc
ttcatcaaagtcattgaggatcacctcatattagaccaccacgatgttcatatatcctac
ctgccccttgctcatatgtttgagagagttgtagagggagtcattctggtgcatgggggg
aggattggtttcttccagggagacatccgcctgctgatggatgacctcaccaccctgagg
cctacagtgtttcctgtggtgccacgcctcctcaacaggatgttcgacaagatctatggg
caggctaacacctctctgaagaggtgggtgctggactttgcctttaaaaggaaagaggct
gagctgctgagtggcatcattaggagggacagcatctgggacaaactcatctttaggaaa
gtgcaggccagtctgggaggacgggtgcgtctgatgataacaggtgctgcccccgtgtct
gccacggtgctgacgttcctgcgagccgcgctgggctgccaattgtatgaggggtatgga
cagactgaatgcacagcgggctgcacaatgacagtaccaggggattggacagcaggtcat
gttggagcgcccctgccatgtaactcggtgaagctggtggatgtggctgagatgaactac
cttgctgccaatggagagggagaggtgtgtgtgaaaggagctaacgtgtttctgggctac
ttgaaggacccagagaagacggaagagaccattgatgctaacggctgggtccacacaggg
gacattggcaagtggttaccgaacggcactttgagaattgtggacaggaagaagcacatc
ttcaagctggcccagggagagtacattgcaccagagaagatagagaatatctacaccagg
agtgacgcagtggcccaggtctttgtgcatggggacagcctacaggcatgcctagtagcc
atcattgtgccagatcctgacttccttcctggctgggccaagaagagaggactggaggga
tcctacggagacctatgcaacaacatggatgtaaagaaggccatcttggaagacatcttg
aaactaggaatagacagtggtctgaaatcttttgagcaggtgaaggacatcaccctgttc
acagagatgttctctatccaaaatggacttctcactcccaccctgaaagccaagagatca
gaactcaggaactacttcagggagcagattgacaaactgtactccaagatcaagatgtga
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