Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390669
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Entry
139390669 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139390669
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139390669
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139390669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf_RING_Vps8
Prok-RING_4
zf-RING_4
RING_XB3-XBAT31
zf-rbx1
zf-C3HC4_4
TerY_C
zf-UDP
zf-RING_11
IBR_1
zf-Nse
zf-RING_10
Zn_ribbon_6
zf-RING_16
DZR
C5HCH
Rtf2
Motif
Other DBs
NCBI-GeneID:
139390669
NCBI-ProteinID:
XP_070994043
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All DBs
Position
31:complement(18995527..18998940)
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AA seq
188 aa
AA seq
DB search
MSSTTQRKRRTGAPSSSRRTAKSSRVTTTMPLRAAAAAETIAVLESSRTSSEEVVDLTCE
GSESTVVDLTNNDSVVVVDEGLQGRRGLGGESYVLSSDEEGDANGSLSADLLSSLQASSR
ARSTPGTVSCPVCMDSYAEIIESGRLVVSTKCGHLFCSQCLRDSLSRSHTCPTCRKKLTH
RQYHPIYI
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtacaacacagaggaagagaaggactggagccccctcaagttccagacgcaca
gccaagagtagcagagtcaccaccactatgccacttcgtgcagcagccgctgctgagacc
attgctgtgctggagagcagtaggactagcagtgaggaggtggtggacttgacatgtgaa
ggttctgagtcaactgtggttgacttgaccaacaatgattctgtggtggttgtcgatgaa
gggcttcagggcagacgtggacttggcggtgagagttacgtgctgagcagtgatgaggag
ggggatgccaatgggagcctcagtgctgaccttctatcttctctacaggccagcagtaga
gccaggtctacgccaggtacagtcagctgcccagtgtgtatggactcctatgctgagatc
attgaaagtggcagactagtggtctccacaaaatgtggtcaccttttctgcagtcagtgc
ctccgcgactcactgtcgagatcccacacttgcccaacctgcagaaagaaactgacccac
aggcaataccaccccatatacatctga
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