Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390683
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Entry
139390683 CDS
T10872
Name
(RefSeq) rho guanine nucleotide exchange factor 6-like isoform X1
KO
K05729
Rho guanine nucleotide exchange factor 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04518
Integrin signaling
ocla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
139390683
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
139390683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139390683
Membrane trafficking [BR:
ocla04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
139390683
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
SH3_2
SH3_1
SH3_9
CH
RhoGEF67_u1
PH
SOS1_NGEF_PH
Mis12
CENP-Q
Motif
Other DBs
NCBI-GeneID:
139390683
NCBI-ProteinID:
XP_070994077
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All DBs
Position
31:complement(28728877..28755875)
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AA seq
771 aa
AA seq
DB search
MNPEEQTVTWLISLGVLNSPKKNIADPEEFLKTSLKDGVVLCKLMERLVPGTVPKYCQEP
RNEAECIANIKEFLRGCTSLKVEGFEPECLYSGEKFNKVLTTLLGVNFATQDCGTERSCP
QSGTPAPSQSTTSHTHTSSRSKSLRRQSKPVEMSENGGGGMVLVKARFQFKQNNEDELSF
NKGDLISVSRQEEGGWWEGSLNGKTGWFPSNYVREVKPCDKPVSPKASQLTKNYYTVVVQ
DILEHEREFVKELQTMLSCYLRPLKASDKLSITDSGSLSGNLEEILTFQQGLVLALDECT
KVPESQQRLAACYLNLIGQIRRLYRSYCSSHPSAVCVLTDHSEELGTFMESQGASPPGIL
TLTTSLSKPFMRLDKYPILLQELERHMEEAHPDYSDILKVTVAFKCLVTQCQDLRKRKNL
ELQILSEPVRGWEGDGMKSLGHVAYMSLVHMQNGTNEEKEERYLMMFPGLLVLLSASPRM
SGFIYQGRLPLTGSTVSRQTEDTENGHYTFEITGSTMDRITVFCSNPQELQEWLDHLHAY
SEGASPVGTIIKPVSMVGTPTHLPSFSTPSQANRGPLEPPKTTKPWSLSCLRPAPPLKPS
AALGYKERMSSILKDSSKSSGPIKNFFPKRRAERKHSDEEFVLRKSTAALEEDAQILKVI
EAYCTGASQHQASQHQASTAVRKVCVPQVLLPEEEKIMVEEMKNNGQTSIEEKSLVDAVY
ALKDEVHELKKENKWMKQCMEEEQKSRKELERVVRKLAKQKNDCAWEDGGH
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgaacccagaggagcagaccgtaacgtggctgatatcattaggggtgcttaattcaccc
aaaaagaacatagctgacccagaagaatttctgaaaacatctctgaaagatggggtcgtc
ttgtgcaaactcatggagcggctcgtgcccggcactgttccaaagtactgtcaggaaccg
aggaacgaagctgaatgcatcgccaatatcaaggagtttttgagaggatgcacatccttg
aaagtagagggatttgaaccagagtgcctgtactctggcgagaaatttaacaaagtgctg
accactctgctgggagtcaactttgccacccaggactgtggcactgagaggtcatgtccc
cagtccggcacacctgctcctagccagtccaccacctcacacacacacacctcttccagg
tccaagtccctgcgcagacaatccaaaccagtggagatgtcagagaacggcggaggcggg
atggtgctggtgaaggcgcgcttccagttcaagcagaacaacgaggatgagctgtccttc
aacaagggagacctgatcagtgtgtcgcgccaggaggagggcggctggtgggagggctcg
ctcaacggcaagacgggctggttccccagcaactatgtccgcgaggtcaagccctgtgat
aaacctgtgtctcctaaagcatctcaactgaccaagaactactacactgtggtggtgcag
gacatcctggagcatgagagggagtttgtcaaggagctgcagacaatgttgagctgttac
ctacgacccctaaaggccagcgacaagctgagcattacagacagtggcagtctgagtggt
aacctggaggagatcctcaccttccagcagggtctggttcttgctctggacgagtgcacc
aaggttccagagagccagcagcgattggctgcctgctacctcaacctgattggtcagatc
aggaggctgtaccggtcatactgttccagtcacccctcggctgtctgcgtactcactgac
cacagtgaggagctgggtacgttcatggagagccagggggccagtccgccaggcatcctg
accctgaccaccagcctgagtaaacccttcatgaggctggacaagtatcccatcctgctg
caggagctggagagacatatggaggaggcccacccggactacagtgacatcttgaaggtt
acggtggcttttaaatgcttggtgacccagtgtcaggacctgcggaaacgtaagaacctg
gaactacagatcctgtcggagccagtgagaggctgggagggagacggcatgaagtctctg
ggtcacgtggcctacatgtccctggtccacatgcagaacgggaccaatgaggagaaggag
gagcgctacctcatgatgtttcccggtctgctggtcctgctgtctgctagtccgcgcatg
agcggcttcatataccagggaaggctgccgctgacaggctccacagtctccaggcagacg
gaggacacggagaacggccactacacctttgagatcacaggaagcacaatggatcgcatc
acagtgttctgcagtaacccccaggagctgcaggagtggctggaccatctccatgcctac
agcgaaggagccagccccgtgggcaccattatcaagccggtcagtatggtgggcaccccc
actcacctgcccagcttcagcacccccagccaggccaaccggggacccctggagcccccc
aagaccaccaagccctggtctctgagctgcctgcgccccgccccacccctcaagccctcc
gctgcactgggctacaaggagaggatgtcttctatcttgaaggactccagtaagagctct
gggcccattaagaatttcttcccaaaacgcagagcagagaggaaacattccgacgaggag
ttcgtcttacggaaaagtacagctgctctggaggaggatgcccagattctgaaagtgatc
gaggcctactgcacaggggccagccagcatcaggccagccagcatcaggccagcacagcg
gtgaggaaagtgtgtgtccctcaggtccttctgccggaggaagagaagatcatggtggag
gagatgaagaacaacggtcagacaagcatagaggaaaagagtctggttgatgcagtatat
gctttaaaggatgaggtccatgaattaaagaaggagaataagtggatgaagcaatgtatg
gaggaggagcagaagtctcgtaaggagctggagagagtggtcaggaagttggccaagcag
aagaacgactgtgcttgggaggatggagggcactga
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