Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390751
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Entry
139390751 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM-like
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139390751
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139390751
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139390751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
Gp5_trimer_C
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
139390751
NCBI-ProteinID:
XP_070994196
LinkDB
All DBs
Position
31:1469735..1477415
Genome browser
AA seq
774 aa
AA seq
DB search
MEGSDSSEPGASDQPEAQRRRQRDRLDREEAFYQFVNNLSEADYRLMRDNNLLGTPGEIT
AEELFSRLQQIKDGPEQQQPSINTSETGEATGELAEGPEDPSNGDTLLDWLNTVRRTGNT
TRSGHRGNQSWRAVSRTNPNSGDFRFSLEINVNRNLAEQQARAEGEAEAQEEAPTRAPGN
GVEVQPEAEAGTEVPMETGEVLEEPVVEEMAVIVEPEAEMEPEADVEAEPEADVEAEPEA
DVEAEPEADVEAEPEADVEAEPEADVEAEPEADVEAEPEADVEAEPEADVEAEPEADVEA
EPEAEVEAEMVPELVVEVVPQPPSPVTTTPPVSRPASPLVQAPPAVPAPPSQPPEEPPRR
GQRRARSRSPEQRRTRARTTRSRSPLTLDRLPRHIPTSATSHSPATQAPAEGSSRTRQHV
LSRQSTAEYEAQSAGTGFDTGSGNAPEPGTTPPQEGEATGGEGAAGRRPPTIMLDLQVRR
VRPGEYRQRDSIANRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVRTYVSTIRIPIR
RISDAGLGEATSMALQTMIRQIMTGFGELSYFMDSDSDSSDSNRGGGNPTGAADLAEALN
TPDGGVAGMAEGAEPPVSVSGHSIGGAGEARTEEREGEDGMGLGLSPGIGLGVGGTPREG
RARPRAPISLEEPGSLPFLRLAHFFLLNDEDEEQPRGLTKEQIDNLSTRNFGESDALKTC
SVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggagggctccgacagttccgagccgggcgccagtgaccaaccagaggcccagcgcagg
cggcaacgggaccggctagaccgggaggaggccttctaccagtttgtcaacaacctgagt
gaggcagactaccggctgatgagagacaacaacctgctgggtaccccaggtgagatcaca
gcagaggagttgttcagtcggttgcagcagattaaggatggaccagagcagcagcagcct
agcatcaacaccagtgagactggagaagctacaggagaactggcagaaggtccagaggac
ccgtctaatggcgacaccctcttggattggctgaacaccgtcaggcggacaggcaacacc
acccgcagtggtcaccgaggcaaccagtcatggcgggcggtgagccggaccaacccaaac
agcggagacttccggttcagtctggagatcaacgttaaccgtaacctggctgagcagcag
gcccgcgcggagggggaggccgaggcgcaggaggaggccccaactagagcacctggcaat
ggggtggaggtccagcctgaggcggaggcggggacggaggtgcccatggagacaggagag
gtgctggaggaaccagttgtggaggagatggctgtcatagtggaaccagaagcggagatg
gagccagaggctgacgtagaagctgagccagaggctgacgtagaagctgagccagaggct
gacgtagaagctgagccagaggctgacgtagaagctgagccagaggctgacgtagaagct
gagccagaggctgacgtagaagctgagccagaggctgacgtagaagctgagccagaggct
gacgtagaagctgagccagaggctgacgtagaagctgagccagaggctgacgtagaagct
gagccagaggctgaagtagaagcagagatggtcccagagttagtagtagaggtagtccca
cagccgcccagccctgtcaccaccacccctcctgtctccagaccagccagtcccctggtg
caggcccctccagccgtccctgcccctcctagccagccccctgaggagcctccgcgacgg
ggccagagacgagcccgcagccgtagccctgagcagcgccggaccagggctcgcaccaca
cgaagtcgttcccccctcaccctggaccgactcccccgccacatccccacctcagccacc
tcacacagccccgccacccaggcacccgcagagggaagctcacggactcgacagcatgtt
ctgtcccggcagagcaccgcagagtacgaggctcagtcagccggaacagggtttgacaca
ggttctgggaacgccccagagcccggtaccaccccaccccaggagggagaggccacgggc
ggggagggagcagcaggacgacgtccccccaccatcatgctggacctgcaggtgcgtcgt
gttcgtccaggtgagtaccgccagagggacagcattgctaacagaacccgctcacgctcc
cagaactccaacaacaccttcctgtacgagagtgagaggggggggttccgcaggaccttc
tcccggtccgagcgtgcgggtgtgaggacgtatgtcagcaccatcaggatccccatcagg
aggatcagtgatgcagggttgggagaggccacctccatggctctgcagaccatgatacga
cagatcatgaccggcttcggagagctcagctacttcatggactcagactctgactcctcg
gactcaaaccgtggaggtggtaaccccactggcgctgccgacctggccgaggcgctcaac
actcccgacgggggagtagccggcatggcggagggggcggagcctcctgtctcagtgagc
gggcatagtattggaggagccggggaggcaaggacagaggagagggagggggaggacggg
atgggtctaggtctgtccccagggataggtttaggggtggggggcacccccagggagggg
cgagctcggccccgtgcccccatcagtctggaggaaccagggtcactacccttcctccgc
cttgctcacttcttcctcctgaatgatgaggatgaggaacagcccagaggactcaccaag
gagcagatcgacaacctctccaccaggaactttggggagagtgatgctctgaagacctgc
agtgtgtgtatcacagagtatgctgaggggaacaagttgaggaagttgccctgttctcat
gagtaccatgttcactgtatcgaccgctggctgtctgagaactccacctgtcctatctgc
cgcagggccgtgttggtgtctgctaaccgggagagtgtggtctaa
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