Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390774
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Entry
139390774 CDS
T10872
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139390774
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
139390774
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Motif
Pfam:
LRR_8
Ig_3
LRR_4
I-set
Ig_2
ig
LRR_5
fn3
Ig_VEGFR-1-like_5th
C2-set_3
LRR_14
C2-set_2
V-set
VEGFR1-3_N_Ig-like
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
139390774
NCBI-ProteinID:
XP_070994238
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All DBs
Position
31:complement(37141358..37159214)
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AA seq
645 aa
AA seq
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MHHLLYAHVFLCCFSVAHSFCPSQCTCVYHGRSDGTGTRSVICNDPDMSDIPVNVPVDTV
KLRVEKTAVRRIPTEAFYYLNDLRYLWITYNSISSVDPAAFYNLKVLHELRLDGNLISTF
PWKSLKEMPSLRTLDLHNNRLTTVAVEATPYLVNITYLDISSNKLTTLSSDFVDIWPPFN
GMPVSSNLSQKVVLGLQDNLWVCDCRISKLIELSKMSDTSVVLMDQFLHCSGPENLAGVK
FQRVELDQCLKPSVMMSATKITASVGSNVLLRCDATGYPTPTLIWTTSDGSRVNNTVVQE
SPGEGVRWSIISLNGVSYKDNGEYSCKAKNFAGNAEAAITLSVAGYVTTNMPPERPDIEA
AGNSPSTTSSAPETGFSNSPSAPSTTTAPPTTTHPAILPPILTKKKPTPSNVQQIAPSKP
SETPQGSDRKLAADQSEKKDASKSVQDLEIVEETPDSAVLLWTTEGLPSNAPLTVVYSTY
DEEDNSKRTMDTDAGSGKVLLEGLTSGLRYQVCLVSKGSAAGKDPCINFFTLDLVEDNAA
NKLLMIISSFACAVALPVIGLLVYKILSLYCRSNVPSSDEELSKDTYVKFETISMKQRTF
NANPAELWTYRQTKESQERMLLCSRSSIDSQMTYKSDSSRSEFLC
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcatcatctcctctacgcccatgtcttcttgtgctgcttcagtgtggcccattccttt
tgtccttcccagtgcacttgtgtttaccacggacggagtgatggaacggggaccagatcg
gtgatatgcaatgacccagacatgtccgacatccccgtcaacgtccccgtggatacagtc
aaactgcgggtggagaagacggctgtgcggcgcatccccaccgaggccttctactacctg
aacgacctgcgctacctgtggatcacctacaactctatctcctctgtggaccctgccgcc
ttctacaacctcaaggtcctccacgaactgcgtctggacgggaacctgatttccaccttt
ccctggaagtccctgaaggagatgcccagtctgaggacgctggatcttcataacaaccgc
ttgaccactgtggccgtggaggctaccccatacttggtcaacatcacctatctggatatc
tccagcaacaagctgaccactctgtcttcggacttcgtggatatctggccgcctttcaat
ggaatgcccgtctcctccaacttgtcccagaaagtggtgctaggtcttcaggacaacctg
tgggtctgcgactgcaggatctccaagctgatcgagctttccaaaatgtctgacacgtca
gtggtactaatggaccagttcctacattgcagcgggcctgaaaacctggctggtgttaag
ttccaaagggtggaactggaccaatgtctcaagccatccgtcatgatgtcagccaccaag
atcacagcctcggtgggcagcaatgtgctcctgcggtgtgatgccacgggttaccccacg
cctaccctcatctggactacttcagatggctcacgtgtcaacaacacagttgtccaggag
tctccaggagagggtgtccgatggtccatcatcagcctgaatggggtctcgtacaaagac
aacggggagtacagctgcaaggctaagaactttgccggcaacgcagaggctgccatcacc
ctgtctgtggcaggttatgtcactacaaacatgcctccagagaggccggacatagaggct
gcagggaatagcccctccacaacgtcctctgctcctgaaactggcttctcaaactcccct
agtgcaccgtctaccaccaccgccccacctaccaccacgcatccagccatcttgccaccc
atcctcaccaagaagaaacccacgcccagcaacgtgcagcagatagcaccatccaaacca
tccgagaccccgcaaggcagcgacaggaagctagcggcggatcagagtgaaaagaaagat
gcttccaagtctgtccaagatctcgagatcgtggaggaaacgccggatagcgcggttcta
ctctggacgaccgaaggtttgccgagcaatgcacctctcaccgttgtttactccacttat
gatgaggaggacaactccaaaaggacaatggataccgatgccgggagtggcaaagttcta
ctcgaaggcttgacttctggattgaggtaccaggtttgtctggtttccaagggaagtgcc
gcgggaaaagacccctgtatcaacttctttactctggaccttgttgaggacaatgctgcg
aacaagctgctgatgatcatcagcagctttgcctgcgccgtggctttacctgtcattggt
ttgctggtctacaagatcctctcactctattgcaggagcaatgtgccttcttcggacgag
gagctatctaaagacacatatgtgaagtttgagacaatatcaatgaagcagaggaccttc
aacgctaatcccgctgaattgtggacctacaggcagaccaaggagtcccaagagagaatg
ctcctctgctccaggtcgagcattgactcacaaatgacatacaagagtgacagttccaga
tcagaatttttgtgctag
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