Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390797
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Entry
139390797 CDS
T10872
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B-like
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04060
Cytokine-cytokine receptor interaction
ocla04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139390797
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
139390797
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocla04052
]
139390797
04090 CD molecules [BR:
ocla04090
]
139390797
Cytokines and neuropeptides [BR:
ocla04052
]
Cytokines
Tumor necrosis fators
139390797
CD molecules [BR:
ocla04090
]
Proteins
139390797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
DUF7237
Motif
Other DBs
NCBI-GeneID:
139390797
NCBI-ProteinID:
XP_070994293
LinkDB
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Position
31:complement(764120..770385)
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AA seq
246 aa
AA seq
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MLYHALLLVSTLTVSFSFFLVYKVAVLEDDINKLRGDISNLKPHSKESPDGMITGMSRTW
ERSKQVASLNSQQQRQTEKDSQTLCSSTASSLRMKREQAGCSGGTVVQQSFLQLSANTKE
QPFVRGNVTVIPWIVALHQGEAISSTGDRIIIQQEGFFIVFGQVLFQSPGTIMGHIVRSR
GTDQRSTELLRCLQEMPQTNCANTCHTGGMVKLEREDELELVIPDRPQAQVSMDADSTFF
GIIRLN
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgctgtaccatgctttactcttagtctctacattaactgtgtcgtttagcttcttcctt
gtatacaaagtagcagttctagaagatgacatcaacaaactcagaggagatatttcaaac
ctaaagccacattctaaagaatccccagatgggatgataactggtatgtccagaacatgg
gagagatcaaagcaagtggcttccctaaattcccagcaacagagacagacagagaaagac
tctcagactctgtgttcctcgacagcatcctctctgagaatgaaacgggagcaggccggc
tgtagtggagggacagtagttcagcagtcgtttctgcagctgtcagccaacacaaaggaa
cagccatttgttagaggaaatgtgacggtgattccttggatagttgccttgcatcaaggg
gaggccatctcttccactggagacagaatcatcatccaacaagaaggcttcttcatagtg
tttggccaggtgttgttccaaagtccaggcaccatcatgggtcacatagtgcgtagtcga
ggaaccgatcagagatccacagagctgctccgctgtctacaggagatgccccagaccaac
tgtgccaatacctgccacactggaggcatggtgaagctggagagagaagacgagctggag
ctggtgatcccagatcgaccccaagcccaggtctccatggatgcagactcaaccttcttt
ggcatcatacggctgaactga
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