Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390807
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Entry
139390807 CDS
T10872
Name
(RefSeq) adhesion G protein-coupled receptor B1-like
KO
K04596
adhesion G protein-coupled receptor B1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04115
p53 signaling pathway
ocla04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
139390807
09143 Cell growth and death
04115 p53 signaling pathway
139390807
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139390807
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139390807
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ocla04030
]
139390807
Peptidases and inhibitors [BR:
ocla01002
]
Mixed peptidases
Family P2
139390807
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Phagocytosis
Others
139390807
G protein-coupled receptors [BR:
ocla04030
]
Adhesion receptor family
Brain-specific angiogenesis inhibitor (BAI)
139390807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AGRB_N
7tm_2
TSP_1
TSP1_spondin
GAIN
GPS
TSP1_CFP_C
TSP1_ADAMTS
HRM
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
139390807
NCBI-ProteinID:
XP_070994313
LinkDB
All DBs
Position
3:complement(21573373..21642775)
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AA seq
1636 aa
AA seq
DB search
MTTTLFSSLPGHLVNPQVPLSSSLLLLLLLQLFSQCPAAPSGPESDTCSTLVQSRFFGHF
LSSSTFPTAPCSWTLQNPDPRRYTIFIKVTKPTSTTDCIPRQLRTFQFDSFLETTRTYLG
MESFDEVVKLCDSSSPVAFLEAGKQFLQMRKGPPRAGVTVTTPNASEDGEFKTEYLVVGK
RNPSMAACQMLCQWLEDCLASSTSNRPCGIMQTPCQCWEPPPPPQLSEGDGCYRNGFYLE
NCLPSANEKSDTDSNSGWSVWAEWKECSSDCGGGVQTRSRTCQSPPEETYLCEGVVEEGR
PCNPQPCSGTGKGRHLTRSQSLRSVDSRKRDGGGGEVDKTRGGGGGQQAPQTVDQTASGE
EWSSWSVCSATCGESWQSRTRFCVSSSYSTQCSGPLREQRPCNNSAVCPVHGTWDEWSPW
SLCSSTCGRGYRDRTRSCKPPQFGGDPCMGPEKQTKFCNIAVCPVDGVWNEWANWGSCSA
SCSNGTMQRIRECNGPSYGGSECRGEWIETRDCFLRECPVEGKWHPWTSWVGCTKTCGGG
SQQRQRICYGPFFGGENCPGDREEVRRCNEKRCPEPHEICAEENFSNVVWKMTPAGDTAA
VRCPPNANGLILRRCTLDDEGIAYWENPTYMKCISNDYRSIQTLTREHLSKAQRGLVGDG
VSEVMTKLRVTSSDGTSYSGDLLAIVDVLKNMTEIFRRAYNSPSNADMRNFVQSVSNLLM
EENRERWEEAQLLGPNIKELFRLVEDFVDVYGLRMKDFQDMVEVTDNLVLSIHKRPVAGN
ADISFPMKGWKGMMDWARSSEDRVTVSKNILSTGKPDTDDLSAFVTGIVLYRNLGSILSL
QRNSTVLNSKVVSVTIKPTPGSLSTPVEVQFSHLYNGTTNQTCISWDESDSSSLLGSWSA
RGCRAVPVDSLRTKCVCNRLSTFAILARLNPDMNMDKMQLPSVTLMVGCGVSSLTLLLLI
IIYVSVWRYIRSERSVILINFCLSIISSNALILIGQTQTRNKVICTLVAAFLHFFFLSSF
CWVLTEAWQSYMAVTGRLRNRIIRKRFLCLGWGLPALVVAVSVGFTKAKGYGTVNYCWLS
LEGGLLYAFVGPAAAVVLVNMVIGILVFNKLVSKDGITDMKLKERAGAPPLQSGTPQSQL
PLSTSSLIRQMTVPLYNMTLKCAKCGVISSADVSTTATSNAMASLWSSCVVLPLLALTWM
SAVLAITDRRSSLFQILFAVFDSLEGFVIVMVHCILRREVQEAVKCRVVDRQEDGNGDSG
GSFQNGHAQLMTDFEKDVDMACRGGTLKRSSLQGDEKPSSQPLTLQKGSNFNTMPASMAK
VHLQNVADYPSHTLTLRREKGGATKGISTELPGAKSIYICDGELFKQLDGELSPRGTGEA
GGPEGTGYIILPNNNNTGTLGRPGKGSKEDTTAKYNISIEQQMPQTRLIHLANSAGVEGV
PGFALKSLPADLVSVSCSEKESPVHNMQNVSGESHMINSMCEQGDSGNSGMMSKSETVST
LSMSSLERRKSRYAELDFEKIMHTRKRHQDMFQDLNRKIHSADQDRASPPGDGKAGKRWS
VSSAGSDKTIMSDKQQTPSKRAWEGIRKTQSPPSWMRKDLEPLAASPLELQNVEWEKASA
TIPLVGQELMDLQTEV
NT seq
4911 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccactcttttttcctccttacctgggcacctggtgaacccccaagtccccctg
tcatcatcgttgctgcttttgctgctgttacaactgtttagtcagtgccctgctgctccc
tcagggcctgagtcagacacctgctccactctggttcagagccgattcttcggccacttc
ctgtcctcctccactttccccacggcaccctgctcctggaccctgcagaacccagacccg
cgccgctacaccatctttatcaaggtaaccaaacctacctccacaacggactgcattccc
cggcagctccgcacattccagtttgactcgtttctggagaccacgcgcacctacctgggc
atggagagcttcgacgaggtggtcaagctgtgtgactcttcatcccctgtggcctttctg
gaggctgggaaacagttcctacaaatgaggaaagggccgccccgggccggcgtgacggtc
accacccctaacgctagcgaagatggggaatttaagacagagtacctggtggtggggaag
cgtaaccccagcatggcagcgtgtcagatgctgtgccagtggctggaggactgcctggca
tccagcacctctaacaggccctgtggcatcatgcagaccccctgccagtgctgggagccc
cctcctcctccacagctcagcgaaggagatggatgctacaggaacgggttctatctggag
aactgcctacccagtgccaatgagaagagtgatactgacagcaacagtggctggagtgtg
tgggcggagtggaaggagtgcagcagtgactgtggtggtggcgttcagacccggagccgt
acctgtcaatctcccccggaggagacatacctgtgtgagggagtagtggaggagggaagg
ccctgtaaccctcagccctgcagtgggacgggcaaaggccgtcatctcactcgcagccaa
tcacttcgctccgtggacagccgcaagcgtgatggcggcggtggcgaggtagacaagacg
cgaggcggtggcggcggacagcaggccccacagacagtggaccagactgcgtcaggtgag
gagtggtcgtcgtggagtgtgtgttcggccacatgcggtgagagctggcagagccgcacg
cgtttctgtgtctcctcctcctacagcacccagtgcagcggcccgctccgagagcagagg
ccctgcaacaactctgccgtctgtccagtgcatgggacttgggatgagtggtcgccatgg
agcttgtgttcgtcaacctgcggccgtggttaccgggatcgcacgcgcagctgcaagccc
cctcagtttgggggagacccctgtatggggccggagaagcagaccaagttctgcaacatc
gctgtctgcccagttgatggggtgtggaatgagtgggctaattggggttcatgctctgcg
tcctgctccaatgggaccatgcagcggatcagggagtgtaatggaccttcgtacggagga
tcagagtgtcgcggggagtggatagagaccagagactgcttcctacgggagtgcccagtg
gaggggaagtggcatccttggacgtcgtgggtgggctgcaccaagacatgtggcgggggg
agccaacagagacagaggatttgctatgggcccttctttgggggtgaaaattgtcctgga
gatcgggaggaggtgcgacgctgcaatgagaagcggtgtccagaacctcatgagatctgt
gcagaggagaacttctccaacgtagtgtggaaaatgactccagcaggggacacagcggcc
gtacgctgccctcccaatgccaatgggctgatcctgaggcggtgcaccctggatgatgag
ggaatagcctactgggagaaccccacttatatgaagtgtatctccaacgactaccgcagc
atccaaacactgactcgggaacacctgtccaaggcccagcgaggacttgtgggggatgga
gtttcagaggtgatgaccaagctcagggtgacgtccagcgatgggaccagctacagtgga
gacttgctggccatagtggacgtactgaagaacatgacagagatcttcagaagggcctac
aacagccccagcaatgcagacatgagaaactttgtccagtcagtcagtaacctgctgatg
gaggagaacagagagagatgggaagaagcacaactgttgggtcctaacatcaaggagctg
ttccggttggtggaagactttgtggacgtctacggtcttaggatgaaagacttccaggac
atggtcgaggtcacggataacttagttctgtccatccacaagcgtccggtggcgggtaat
gcagacatcagcttccctatgaagggctggaaggggatgatggactgggcccgcagctct
gaggacagagttactgtctccaagaacatcctctccacaggcaagccagatacagatgac
ttgtcagcgtttgtcaccgggatcgttctctacagaaacctgggcagcatcctatctcta
cagagaaacagcactgtgctcaactccaaggtggtgtctgtgaccatcaagcccacccca
ggatccctctctaccccggtggaggtccagttctcacacctttacaacggcaccacaaac
cagacctgcatctcctgggacgagagtgacagctcttcgctgctcggatcgtggtctgcc
aggggctgcagagccgtgcctgtcgactcattgagaaccaaatgcgtgtgtaacagactc
tcaaccttcgccattttagcacggctaaatcctgacatgaacatggataaaatgcagctt
ccctctgtgacgctgatggtgggctgtggagtctcctctctcaccttgctgctcctcatc
atcatctatgtgtcggtctggaggtacattcgctccgagcgctccgtcatcctcatcaac
ttctgcctctccatcatctcctccaacgccctcatcctcattggtcagacgcagacacgg
aacaaggtgatctgcacgctggtcgctgctttcctgcatttcttcttcctgtcgtcgttc
tgttgggttctgacagaggcgtggcagtcatacatggccgtgactggccggctgaggaac
cgcatcatccgcaagcgattcctgtgtctgggctggggtctacctgctctggttgtggca
gtctctgtgggtttcaccaaagctaagggatatggcaccgtcaactactgctggctgtct
ctggaaggtggtctgctttatgcgtttgtgggaccggctgccgctgtagtcttggttaac
atggttatcgggattctcgtatttaacaaactggtgtccaaagacggcattactgatatg
aaactgaaggagagggcaggggctcctcctctccaatcaggaacacctcaatctcagctc
cccctttccacctcgtcactgattcgtcagatgacagtaccactgtacaatatgacgctc
aaatgtgccaagtgcggagttatctcgtcggctgacgtttctaccacagctaccagtaac
gccatggcatcgctgtggagctcctgtgtggttctgcctctcctggccctcacctggatg
tctgctgtcctggccatcaccgaccgacgctcctccctcttccagatcctgttcgctgtg
tttgattcgctggaaggcttcgtcatcgtcatggtgcattgcatcctgcgcagagaggtt
caagaggcagtgaagtgtcgggtagtggaccgccaggaggacgggaatggagactcaggg
ggatctttccagaacggacacgctcagcttatgactgatttcgagaaagacgtcgacatg
gcttgcagaggaggtactctgaagcgttcctctctccagggtgatgagaagccatcttcc
caacccctgacccttcagaagggctctaacttcaacaccatgcctgccagcatggccaag
gtccacctccagaatgtggcagactaccccagtcatactctcaccctgcgcagggagaag
ggtggcgccaccaagggcatcagcaccgagctgccgggagccaagtccatctacatctgt
gacggggagctctttaaacagctggacggggagctgtctccacgggggacaggggaggcc
ggggggcctgagggcacagggtacatcatcctgcctaacaacaacaacactggcaccctg
gggcgacccggaaagggcagcaaggaggacacgacggccaagtacaacatcagcatcgag
cagcagatgccccagaccaggctcatccacctggccaactcggcgggggtggagggcgtc
ccaggtttcgcgctgaagagcctgcctgcagacctggtcagtgtctcctgctcagagaag
gagtcgcccgtccacaacatgcagaacgtctccggagaatcccacatgatcaacagcatg
tgtgaacagggtgattctggtaactctggaatgatgtccaagagcgagaccgtgtccacg
ctctccatgagctccctggagagacgaaaatctcgctatgcggagctggactttgagaag
atcatgcacacacggaagcgtcaccaggacatgttccaggacctgaacaggaagatccac
agtgcagaccaggacagggcgtctccgcctggcgatgggaaggcagggaagaggtggagt
gtgtcctcagcaggcagcgacaagaccatcatgagtgacaagcagcagacacccagtaag
agagcctgggagggcatcaggaagacccaatctcccccgtcgtggatgaggaaggacctg
gagcccttggcggcctctcccctggagctgcagaacgtggagtgggagaaggccagcgcc
accatccctctggtgggacaggagctcatggacctgcagacagaggtgtga
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integrated database retrieval system
