Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390808
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Entry
139390808 CDS
T10872
Name
(RefSeq) FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139390808
03036 Chromosome and associated proteins [BR:
ocla03036
]
139390808
Transcription factors [BR:
ocla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
139390808
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
139390808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
139390808
NCBI-ProteinID:
XP_070994309
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All DBs
Position
31:complement(32343287..32355561)
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AA seq
706 aa
AA seq
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MGDTLEFNEIYQESKGSWNDGRLRFSKQNVVYKSSKTGKVDNIPAAELSQATWRRVCLGH
GIKLATSTGHVYKYDGFRDTDYERISEFFKANYKVELTEKDMCVKGWNWGTAKFSGPLLS
FDVNDSSVFEIPLASVSQCATGKNEVTLEFHQNDDAEVSLMEVRFYVPPGPADEGADPVE
AFAANVLSKADVIQATGDAVCVFKELQCLTPRGRYDILIYPAFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEELRLTLNMSEEEVEKRYE
GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGNTPGAQCITCSYKAQSGLLYPLERG
FIYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEVETKQGNQFTFSSIEREEYGKLFDFV
NAKKLNIKNRGFKEGMKSKNNEYSDSDEDQHDAYLERMKAEGKIREEGDGSNDSDEDTDE
SFNPGEESDVAEEYDSNASESESGSGGDGSDDEGKKKTAKKAKVVKERKPRKEKKQKDTN
APKRPMSSYMLWLNSSREHIKSENPGISITEISKKAGEMWKQIGKDDKEGWDRKAEEAKK
NYEKAMKEYRENGGGSSTPSKKESKKAGGKKEDKAGGKKRKSDGGEEEKEQGGNDSFKSR
EFISSEESSSEGERKAKKAKGKPKGKESEEEEEVVTTPPSSEEDSD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacgcttgagttcaacgagatctaccaggaatccaaggggtcctggaacgac
ggtcgtctgaggttcagtaagcagaatgtggtgtataagagcagtaagacggggaaggtg
gataacatcccggcagcagagctgtcccaggccacgtggaggcgtgtgtgcctgggacac
ggcatcaagctggccaccagcaccggacatgtctacaaatatgacggcttcagagacacg
gattatgagaggatctcggagttcttcaaggccaactacaaggtggagctgacagagaag
gacatgtgtgtgaagggctggaactggggcactgctaaattttctggtccattgttgtcg
tttgacgtgaatgacagctccgtgtttgagatccccctggccagcgtgtcccagtgtgcc
accgggaagaacgaggtgacgctggagttccaccagaacgatgacgctgaggtctctctc
atggaggtccgtttctacgtcccccccggccccgcagacgagggggcagaccccgtggag
gcgtttgccgcgaatgtgctgtctaaggccgatgtgatccaggctacaggagatgctgtg
tgtgtcttcaaagagctgcagtgcctcacacccaggggcaggtatgatatcctcatctac
cccgccttcctccacctccatggtaagacgtttgactacaagatcccctacaccaccgtg
ctgcgtctcttcctgcttccacacaaggatcagagacagatgttctttgtgatcagtctg
gacccgcccatcaagcaggggcagacccgttaccacttcctcatcctgctcttctctaag
gaggaggagctccgcctcaccctcaacatgagcgaggaggaggtggagaagcgttatgaa
gggaagctcagtaagaacatgtcaggttctctctatgagatggtcagcagggtgatgaag
gctctggtcaacaggaagatcaccgtgcccggaaacttccaggggaacaccccaggggcc
cagtgtataacgtgttcctacaaggcacagtccggtttgctctacccgctggagaggggt
ttcatctacgtgcataagccgcccgtccacctgcgcttcgaggagatctcctgtgtcaac
ttcgccagaggcaccaccaccacgcgctccttcgacttcgaggtggagaccaagcagggg
aaccagttcaccttcagcagcatcgagagggaggagtacgggaagctgtttgactttgtc
aacgccaagaaactcaacatcaagaatagaggattcaaggagggcatgaagagtaagaac
aacgagtacagtgactccgatgaagaccagcacgatgcctacctggagaggatgaaggct
gagggcaagatcagagaggagggagacggcagcaacgactccgatgaagacaccgatgag
tctttcaaccctggggaggagagtgatgttgctgaggagtatgacagtaacgcctcagag
agtgaaagtggcagcggaggtgatggcagcgatgacgagggaaagaagaagactgcaaag
aaggccaaagtagtgaaggagaggaagccacgcaaagagaagaagcagaaggacaccaac
gcccccaagaggccgatgagttcctacatgctgtggctcaactccagccgcgagcacatc
aagtcggaaaaccccggaatctcaatcacagagatctccaagaaggccggagagatgtgg
aaacagatagggaaggacgacaaagaggggtgggacaggaaagcagaggaggctaagaag
aactatgagaaagccatgaaggaatacagagagaacggtggaggctcctctacaccctcc
aagaaggagagcaagaaggcaggaggcaagaaggaggacaaggcaggaggcaagaagagg
aagtccgacggaggagaggaagaaaaggagcaaggagggaacgacagttttaagagccga
gagtttatctccagcgaggagagttcgtctgagggcgaacggaaggccaagaaagccaaa
ggcaaacccaagggcaaggagtctgaggaagaggaggaagtggtgaccacgccccccagc
tctgaggaggattctgactaa
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