Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390965
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Entry
139390965 CDS
T10872
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04080
Neuroactive ligand-receptor interaction
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139390965
04082 Neuroactive ligand signaling
139390965
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139390965
Ion channels [BR:
ocla04040
]
Ligand-gated channels
GABA-A
139390965
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
139390965
NCBI-ProteinID:
XP_070994497
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Position
31:complement(13344351..13350265)
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AA seq
450 aa
AA seq
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MIPTHPLTFLTLGMVLTQSGCMLPESHHWEDSNGSQLHPTIQKLMKGYNRYMRPNFNEGP
VEIGMSLDIASIDAISEINMDYTATIFLRQRWRDSRLVFPGNESVSVDGRLVSLLWIPDT
FIPDSKRSFLHDVTVENRLIRIFSNGTVLYALRITATIACNMDLTKYPMDRQVCTLQLES
WGYNLQDVIFYWTRGNDSVKGLDTLRLAQYSIESYYTSVSEAVYETGLYPKLVLHFALRR
NVLFFILETYAPSTLLVVLSWVSFWISQSSVPARTCIGVTTVLTMTTLMMGARTSLPNAN
CFIKAIDVYLGICFTFIFGALLEYACAHFCTVQHQTVGDIHRELLQEFDDSNGNGTMPVV
SSSQPNQVLELGSTQKDLVDQSGTSVSEAEATEKKPEKGCGLTSFKNTARRALSVFNVEN
PHNIDRHARTMFPLTFLAVNVFYWLYYLFI
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgatacctacccaccctttgaccttcctgaccctgggcatggtcctaactcagagtgga
tgtatgctccctgagagtcaccactgggaggactcgaatggctcccagctgcatcccacc
atccagaaactaatgaagggatataaccgctacatgaggcccaacttcaatgagggccct
gttgagattgggatgagtctggatatcgccagcattgatgccatctcagaaatcaatatg
gactacacagccactatcttcctgcgtcagcgttggagggactcccgactggtgttccca
gggaatgagagtgtgagtgtggatggacgactagtctccctcctctggatcccagacacc
ttcattccagactccaaacgctccttcctgcatgacgtcaccgtggagaaccgtctcata
cggatcttcagcaacgggaccgttctctatgctctacgaataacagcgaccatcgcctgc
aacatggacctgaccaagtacccaatggacagacaggtgtgcaccctgcagctggagagc
tggggctacaacctacaggatgtaatattctactggactagagggaatgactcagtgaag
ggtctggacacactgcgccttgcccagtacagtattgagagttactacacatctgtttct
gaggctgtctatgagacagggctgtacccgaagctggtgctccactttgctctgcgcagg
aacgtgttgttctttatcctggagacatacgccccttctactctgttggtggtgctctcc
tgggtctccttctggatcagccaatcatctgtccctgcacgcacctgcatcggtgtgacc
acagtactgacgatgactactctcatgatgggtgcccgtacctctctccccaacgccaac
tgtttcatcaaggccatagacgtgtacctgggcatctgtttcaccttcatctttggggcg
ctgctggagtacgcctgcgcccacttctgtaccgtgcagcaccaaaccgtaggagacata
cacagggagctccttcaggagtttgatgactccaacggaaacggtaccatgcccgtggtc
agctccagccaaccaaatcaggtcctggagctaggctccacccaaaaggatcttgttgac
caatcggggacgagtgtcagcgaggccgaggctacagagaagaagccggagaaggggtgt
ggcctgacgtcgtttaagaacacggcgcggcgtgcgttgtctgtgtttaacgtagagaac
cctcacaacatcgaccgccatgctcgcaccatgttccccctcaccttcctggcggttaat
gtcttctactggctctactatctcttcatctga
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