Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390969
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Entry
139390969 CDS
T10872
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-like
KO
K03265
peptide chain release factor subunit 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139390969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139390969
03012 Translation factors [BR:
ocla03012
]
139390969
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
139390969
Translation factors [BR:
ocla03012
]
Eukaryotic type
Release factors
139390969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
139390969
NCBI-ProteinID:
XP_070994502
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All DBs
Position
31:complement(27038060..27046500)
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AA seq
443 aa
AA seq
DB search
MADDPNAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLYVANDKVNVAGMVLAGSADFKTELSQSD
MFDPRLQAKILKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYILRLHGAESVGTENDEKTLYLTPEQEKDK
SHFTDKETGQDHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGCLR
YRVDFQAIDYQAEDDECFDLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaccctaacgcggcagacaggaacgtggagatatggaaaatcaagaaactg
attaaaagtttggaagctgcccgtggtaatggaaccagtatgatctcgctgatcatcccc
cctaaggaccagatctccagagtggccaagatgttggcagatgagtttggcacagcctcc
aacatcaagagcagagtcaacaggctctctgtgctcggggccatcacctctgtacagcag
agactaaagctatacaacaaggtgccgcctaatggcctggtggtgtactgtggaaccatc
gtgacagacgagggcaaagagaagaaagtcaacattgactttgagccttttaaacccatc
aacacctccctgtacctctgtgacaacaagttccacactgaggcgttgacagccctgctg
tctgatgacagtaagtttggcttcatagtgatcgatggtagtggggctctattcgggacg
ctccaggggaacactagagaggtcctgcacaagttcactgtggacttgcccaagaaacac
ggcagaggaggtcagtctgctttgcgctttgcccgtctgaggatggagaagagacacaac
tatgtgaggaaggtggctgagacagctgtccagctctatgtggccaacgacaaggtcaac
gtggccggaatggtcctagcagggtctgccgacttcaagactgaactcagccagtccgac
atgttcgaccctaggttacaggcaaagattctaaagctggtggacatctcgtacggaggg
gagaacggtttcaaccaggccatcgagctgtcggcagaggtcctctctaacgtcaagttc
atccaggaaaagaagctcataggccggtactttgatgagatcagtcaggacacggggaag
tactgttttggggtggaggacacactcaaagccctggagatgggggctgtggagatcctc
atcgtttatgagaacctagacaccatgcgctatattcttcgcctgcacggggctgagagt
gtcggaacagaaaacgatgagaagactctgtatttaacaccagagcaggagaaggacaag
tcccacttcacagacaaggagactgggcaggaccacgagctgattgaaagcatgcctctg
ctggagtggtttgccaacaactacaagaagtttggagccacgctggagatcgtcacagac
aagagtcaggaagggtctcagtttgtcaagggcttcggtggcatcgggggatgcttgcgg
tacagggtggatttccaggccatagattaccaggcggaggacgacgagtgttttgattta
gatgactactag
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