Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139391142
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Entry
139391142 CDS
T10872
Name
(RefSeq) transforming growth factor beta activator LRRC32-like
KO
K26316
transforming growth factor beta activator LRRC32
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139391142
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRR_LRWD1
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
139391142
NCBI-ProteinID:
XP_070994802
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Position
31:complement(760700..763335)
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AA seq
669 aa
AA seq
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MIRPTATTFSLVLLLYCSLSHSLTQFNTVTGRIPDDQQETTSWRFRNLTSVPEGLDVRLR
ELDLSNNVIRHINSQSLALPSLLRLDLSYNQLEIISEGAFRDVAQLQELNLARNALSHNV
DSTSRALGSLHRLRRLDLSLNGLDDDAAGLYLRDKSILERLDLTGNGLTRLTPKLFAESL
SVRSIRIENNLITAIEEGTFEPLKKLKILNLARNNLVYICDFKLHQVKLLNLSRNSIEFF
VTREDGHPYELEILDLSFNNLLYFPMVPKTNRLRYLHLQSNMVGTLETDTLISEADSLYR
ELTSEDEVNDAVDNNNIYSNWKLMPLVYMDLSSNHFRSLPVETLSHLTSLVTLNLSKNCL
QDISGNGHVGGYHQPSLTFPSLRYFDLQNNGLRQLSTFFLEALPNIEILNLKENSVRPCD
PKDQLGPSETTRVSLNSMSPCVSFWNIKTLRSLDLQDNGIKTLHQNTFKGTPLVSLNLAS
NVDIIFDIGALEGLQSSLQSLSISGNSMTTSALSLPCLKALRRLNMSNNSVDVLPGIISC
SPLTELDLRNNELTSMNESVVDRLSLYLDVLYVSGNSFNCCDTNWLKALNKEKVNIPDLH
HAVCLSVNGTLLTGLLRNHSLHCSLELSPKITEPNLGQIMIILLFVSTVLITLVVFVKKV
CCNTGSLIV
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgatcagacctacagctacaacattcagcttagtgctactgctgtactgctctctgtct
cacagtctcacacagttcaacactgtgacaggaaggatacctgatgaccaacaggagacg
acttcctggaggttcaggaacctaacatctgttcctgaggggctggacgtgaggctgagg
gagctggatctgtccaacaacgttataagacatataaacagccagagtctggctcttcca
tccctactgagactggacctcagctacaaccagctagagatcatatctgaaggggctttc
agagatgtggcccagcttcaagagctgaacttggccaggaatgcattgagccacaatgtg
gacagtaccagccgagctcttgggtctctccacagactgaggaggttggatctctctctg
aacggtctggatgatgacgcggcgggactttaccttcgtgacaaatcaattctagaacgc
ctagatctcacgggcaacggtttgacgcgactcacgcccaagctgtttgcagagagcctg
agcgtgagaagcattcgcatcgagaacaatctgatcacagcaatagaggagggaacgttt
gaaccgttgaagaaactcaagatcttaaatttagcgagaaataatctagtctacatctgt
gattttaaactccatcaggtgaaactcttgaatcttagcaggaattccatagagttcttt
gtcacccgtgaagacggtcacccatacgagctggagatcttagatctgagcttcaacaac
ctcctctatttccccatggtccccaagaccaaccggttgagatacctccacctacagagc
aacatggtggggaccttagagacagacaccttaatatcagaggcagactctctgtacaga
gaactaacaagtgaagatgaggtaaatgatgctgtagacaacaacaacatatactctaac
tggaaactgatgccgttagtttacatggacctcagtagtaaccacttcaggtctctacct
gtggagactctgagccatctgacgtctttggtgacgctgaacctcagcaagaactgtcta
caggacatcagcggcaacggccatgttggaggctaccaccaaccttccttgacctttccg
tctctacgctacttcgacctgcagaacaacggtcttcgacaactctccaccttcttcctg
gaagccctaccaaacatagagatattaaacctgaaggagaactctgtgaggccttgtgat
ccaaaggaccaactgggaccatctgagacaacgagagttagtcttaatagtatgtcccct
tgtgtttccttctggaatatcaaaactctgagaagtctagatctccaagacaacgggatc
aaaacactccatcagaacacatttaaaggaacccctttggtttctctcaacctggccagt
aatgtagatataatctttgatattggcgctctagaagggttgcagagtagtctccagtct
ctgagtatcagtgggaacagcatgacaacctctgccttgtctctgccttgtctgaaagca
ttgagacgactcaacatgtccaacaacagcgtagacgtcctcccgggcatcatcagctgt
tctcctttgacggagcttgacctgagaaataacgagctaacgtctatgaatgaatctgtg
gttgatcgtttgtctctatatcttgatgtgttgtatgtcagtggcaactctttcaactgc
tgtgacaccaactggctaaaagccctaaacaaagagaaagtaaatattccagaccttcac
catgctgtgtgcctcagtgtcaatggtactctgttgactggccttctgcgtaaccattca
ctgcactgttcattggaacttagcccaaagataacagaaccaaaccttgggcaaataatg
ataatacttttgtttgtgtcaacagtattgataacattagttgtatttgtgaagaaggtt
tgttgcaacacggggtcattaattgtgtaa
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