KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139391216
Entry
139391216         CDS       T10872                                 
Name
(RefSeq) homeobox protein CDX-1-like
  KO
K09312  homeobox protein CDX1/4
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ocla03000]
    139391216
Transcription factors [BR:ocla03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain ANTP: HOXL
    139391216
SSDB
Motif
Pfam: Homeodomain Caudal_act Homeobox_KN HTH_NDX
Other DBs
NCBI-GeneID: 139391216
NCBI-ProteinID: XP_070994936
LinkDB
Position
31:24898975..24902916
AA seq 241 aa
MYMSYLLDKETGMYSNSMRRQTQNFTSYHHVTGISDPHAQTTSLWNPVYEAPLEQWSHYG
HSAGFPGSNPVMEQIRVSSTELTSISPAGPGILLSLDSHTRQHSPDSQRRNSYIGIRRNV
HSSSTGGKTRTKDKYRVVYTDLQRLELEKEFQSSRYITIRRKTELSLGLGLSERQVKIWF
QNRRAKERKITKKKIQLSQQASRITPTLTPPSLADPSNGSMATSSSSLLSETISTTIKEE
Y
NT seq 726 nt   +upstreamnt  +downstreamnt
atgtacatgagttacctgctggataaagaaaccggaatgtactcaaattccatgagacgc
cagactcagaacttcaccagttatcatcacgtcacgggcatcagtgacccgcatgcccag
acaacaagtctatggaaccccgtttacgaagccccgctggagcagtggtcacattatggc
cacagcgcgggtttccccggttcgaaccctgttatggaacagatacgtgtcagttccact
gaactgacttccatctcgcctgccggtcccggaattctcctgtcactcgattcacatacc
aggcagcactctccagactcacagagaagaaactcatacattgggatcagacgaaatgta
cattcatccagcactggagggaagacacgcaccaaggacaagtacagggtggtgtacaca
gacctgcagcgcctggagctagagaaggagttccagtccagtagatacatcaccatcagg
aggaaaacagaactttccctgggcctcggcctctcagagagacaggtgaagatctggttc
cagaacaggagagccaaggagaggaagataaccaagaagaagatccagctgtcccagcag
gcttctaggatcactcccaccctgacccctcccagcctggctgaccccagcaacggttcc
atggcaaccagctccagcagcttgttgtcagagacgatatcaacgactatcaaagaggag
tactga

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