KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139391224
Entry
139391224         CDS       T10872                                 
Name
(RefSeq) vascular endothelial growth factor A-like isoform X1
  KO
K05448  vascular endothelial growth factor A
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010  MAPK signaling pathway
ocla04020  Calcium signaling pathway
ocla04370  VEGF signaling pathway
ocla04510  Focal adhesion
ocla04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    139391224
   04370 VEGF signaling pathway
    139391224
   04020 Calcium signaling pathway
    139391224
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    139391224
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    139391224
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ocla04052]
    139391224
   00536 Glycosaminoglycan binding proteins [BR:ocla00536]
    139391224
Cytokines and neuropeptides [BR:ocla04052]
 Cytokines
  Growth factors (RTK binding)
   139391224
Glycosaminoglycan binding proteins [BR:ocla00536]
 Heparan sulfate / Heparin
  Growth factors/receptors
   139391224
SSDB
Motif
Pfam: PDGF VEGF_C
Other DBs
NCBI-GeneID: 139391224
NCBI-ProteinID: XP_070994949
LinkDB
Position
31:16263613..16273190
AA seq 235 aa
MGIMLQVILGMFQFLLLSRIPTSHAKLAHWRPADTTPKSREVRRWLEVYSRSGCEPRDTL
VEVWREFPGETHHLFVPSCVSVRRCGGCCSDEALECVPSLTHSITMELMKTSFMKHELIE
LDFVEHSQCECRLKENLQSAPTRPAKPLRKGRKRERGKSKRKKSGTIPSSPPTTPSPPPT
TPSPLPGPRCTPCPGRKWTLDLHSCRCRCNVTTESCSQKGRRLNQHLCRCEARRR
NT seq 708 nt   +upstreamnt  +downstreamnt
atggggattatgcttcaagttattctaggaatgtttcagttcctcttgctctccagaata
cccacgtcccatgctaagctagcccactggagacctgcggacaccacccccaaatctaga
gaagtgcgtcggtggttggaggtgtactctcggagtggttgtgagcccagggataccctg
gtggaggtgtggcgggagttcccgggagagacgcatcacctcttcgtgccttcctgtgtg
tcggtccgccgctgtggtgggtgctgctccgacgaggcactggagtgtgtgccctcactc
acacactctatcaccatggagctaatgaagacctccttcatgaagcatgagctcattgag
ctggacttcgttgagcacagccagtgtgagtgcagactaaaagagaatcttcaatcggcc
cctaccaggcctgcgaagcctctgaggaaaggcaggaaaagggagagaggaaaatccaaa
cgaaagaaaagtggaactataccctcctctccccccactacgccctctcctcccccgacc
accccgtctcccttgccaggccctcgatgtaccccctgtcctgggaggaagtggacactc
gatttgcattcgtgtcggtgtcgctgcaacgtgaccacagagagctgcagtcagaaaggg
aggaggctcaaccagcacctctgcagatgtgaggccaggaggcggtga

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