KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139391228
Entry
139391228         CDS       T10872                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03020  RNA polymerase
ocla03420  Nucleotide excision repair
Brite
Transcription machinery [BR:ocla03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     139391228
Messenger RNA biogenesis [BR:ocla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     139391228
DNA repair and recombination proteins [BR:ocla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      139391228
SSDB
Other DBs
NCBI-GeneID: 139391228
NCBI-ProteinID: XP_070994956
LinkDB
Position
31:5489523..5492665
AA seq 172 aa
MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ
PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD
PNSNPPCYKTTDEDIVIQQDDEIRLKIVGTRVDKNDIFAIGSLMDDYLGLVS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgttttatcatatttccctggagcatgagatcctgctccaccctcggtactttggtcca
aatctcctgaacactgtgaaacagaagctcttcacagaagtggagggaacatgcacagga
aaatatgggttcgtcattgcggtgaccaccattgacaacattggtgcaggtgtcatccaa
ccgggcaggggattcgtgctttacccagtcaagtacaaggctattgttttccgtccattc
aaaggcgaggtggtagatgccgtggttacccaggtcaacaaggttggccttttcacagag
atcggccccatgtcctgtttcatctctcgtcattccattccctcagagatggagtttgac
cccaactcaaatcctccctgttataagaccactgacgaggacattgtaatccaacaggat
gatgagattcgtttgaaaatcgtgggaacaagagtggataaaaacgacatttttgccatt
ggatccctcatggacgattacctgggtcttgtcagctga

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