Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139391670
Help
Entry
139391670 CDS
T10872
Name
(RefSeq) ubiquilin-4-like
KO
K04523
ubiquilin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139391670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139391670
03051 Proteasome [BR:
ocla03051
]
139391670
Membrane trafficking [BR:
ocla04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
139391670
Proteasome [BR:
ocla03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
139391670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
STI1-HOP_DP
UBA
Rad60-SLD
Ubiquitin_5
UBA_7
YukD
UBA_HOIP
CUE
Rad60-SLD_2
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
139391670
NCBI-ProteinID:
XP_070995198
LinkDB
All DBs
Position
32:complement(14889654..14900938)
Genome browser
AA seq
615 aa
AA seq
DB search
MLTRNWTPNPSDSIGGVNMEDNGGEDPVNNNNDTTVSSEGSIIKVTVKTPKDKEEIAISE
DASVTQFKEEISRRFKAKQDQLVLIFAGKILKDGDSLNQHGIKDGLTVHLVIKTAHKAGD
GASSSTSCTSQVGSSSGSSSGPSSAAHSSTVGSTGGPASAPPQTPNILTGFGDLSSLSSM
GMGSANFMELQQQMQSQLMSNPEMLSQIMENPLVQNMMSNPDLMRQMIVANPQMQQLMER
NPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQE
PMFSAARDQFGNNPFSALGGNSDGGVQPSRTENREPLPNPWGPPSSTNPSEGGGGTGTTG
SSTTGSTNPSVSNPLGVNSASLGNGMFSSPGMQSLMHQISENPQLMQNMLSAPYMRSMMQ
SLAQNPDMASQVLMNNPLFAGNPQLQEQFRSQLPVFLQQMQNPEALSVMTNPRAMQALLQ
IQQGLQTLQTEAPGLMPSLAPGGLPGGLPGGLVGGLPGGIPTTPLSVGGGVAPENPASSP
SAGTNPAQQLMMQQMLQMFAGGNASSQTPEVQFQQQLEQLGAMGFINREANLQALIATGG
DVNAAIERLLGSQPS
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgttgacccggaattggacgccaaatccgagcgattctatcggaggagtaaacatggag
gacaacggcggtgaagatcctgttaataacaacaatgatacaacggtatcttcggaggga
tctattattaaggttacagtcaaaaccccgaaagataaggaagaaatcgccatatcggaa
gatgcctcggtcactcagtttaaggaggagatctcgcggaggttcaaagccaagcaggat
cagttggttctgatctttgcagggaagatcctgaaagacggggactcgctcaaccaacac
ggcatcaaggacggcctgacagtccacctggtcataaagacggcacacaaggcaggagat
ggtgctagttcctccacctcctgcacctcccaggtaggcagcagtagtggcagctcctcg
ggccccagttctgcagcccactcctccacagtagggtccactggaggccctgcctcggca
cccccacagacccccaacatactgaccgggttcggtgacctgtccagcctgagcagtatg
ggcatgggctcagctaacttcatggagctgcagcagcagatgcagagccagctgatgtcc
aacccagagatgctgtctcagatcatggagaaccccctggtgcagaacatgatgtccaac
ccagacctgatgaggcagatgatcgtggccaacccgcagatgcagcagctgatggagcgc
aaccccgagatctcccacatgctcaacaaccccgagcttatgagacagaccatggagctg
gccaggaaccctgctatgatgcaggagatgatgcgtaaccaggatcgggcgcttagcaac
ctggagagcataccgggaggctacaatgccctgcgaaggatgtacacagacatccaggaa
cccatgttcagcgccgcacgagaccagtttggaaacaaccctttctcagccctggggggc
aactctgatgggggggtgcagccatcgaggacagagaaccgggaaccactgcccaaccca
tggggcccccccagctccaccaacccctctgagggtggagggggcacaggcaccacaggc
tcctctaccactggcagcaccaaccccagtgtctccaaccctctgggtgtcaactctgcc
agtctgggaaatggcatgttcagcagtccaggcatgcagagtctgatgcatcagatttca
gagaacccccagctgatgcagaacatgctgtctgctccctacatgcgcagtatgatgcag
tctctggcccagaacccagacatggcctcccaggtgttgatgaataatcccctttttgct
ggaaacccccaactgcaggaacagttcaggagccagcttcctgtcttcctgcagcagatg
cagaacccagaggcgctctctgtcatgaccaacccccgagccatgcaggctctcctccag
atacaacagggtctacagacgctgcagacagaagcaccgggactcatgcccagtttggca
ccgggtgggctgccaggtggtctaccaggggggctagtaggtggattaccaggtggaata
cccacaacccccctgtccgtaggagggggtgtggctccagagaaccccgcctcttcgccg
agcgccggaacaaaccccgcccagcagctgatgatgcagcagatgctccaaatgttcgca
ggagggaatgcctcgagccagaccccggaggtgcagttccagcagcagctggagcagctg
ggtgctatgggcttcatcaaccgagaggccaacctgcaggccctgatcgctacaggagga
gatgtcaacgctgccatcgagagactgctgggctctcagccctcataa
DBGET
integrated database retrieval system
