Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139391671
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Entry
139391671 CDS
T10872
Name
(RefSeq) protein capicua homolog
KO
K20225
capicua transcriptional repressor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139391671
Transcription factors [BR:
ocla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
139391671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Cic_C
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
139391671
NCBI-ProteinID:
XP_070995199
LinkDB
All DBs
Position
32:32630062..32663526
Genome browser
AA seq
2576 aa
AA seq
DB search
MKPIKKQGRRSPPSTRAKGGKRRGAVDSGEKRDSDENRDQSPKSQTPPQTSSHSESSQEE
SMTLTARATPEREVHREGPQLPETAAAAAGSLPGKSEDSRPGSVKSLSAHSTDSSSSAAS
AANSPNPSSNRKTATFKARVPKKKYTSEHCAAAAAAASNHGYHGNPGTPPLNSSSAHCGS
NTGSQSSGLSSGPGSTASDGGLLTDINSQTRRPVEDYITTIAPPQDRDNTPGPPPTGDRD
RRGPEGGREISPSPVRCSSTDTASEHDPDVSDLRRPNFPHTNPNTEAHTLDLVQRSTPRT
PTPQSLSDALADALAKGLKNQRVLARQARRRTGKWEEENGRGVGRESMDSVFRAGVVRRV
SGEHGSLEVQLNGEKELYRYPFREGPQGPVDIIMDAPPPGSQAVPIGTPVCVPFGGNEDG
GTTEAQRQWYREGLVTQVDSHPAVSYPYRVLLEDRAPPGDEEGDGRVGTPTAVWVSRQSL
RLLVPPWDLDLGPSGGGREEGDAAAERGREREREREDRDEIEVEPELCFPSHGMGLSAAV
AGSVLGRLSYPGTAPASSSSSTVSSPVTPASVLSLVPGRDWEREKDLVERERELQRKQER
DNRERAKQHHHFMPLTPEEDIEVSHFSMVPMGAAGGAAKALAVSQHRHILSKPPPGYLSP
HLSVVRGLGGTPLVGPHLALNPHPPASPTVLMGLESGALSAGAAVIATPQLPLPSSSSRG
SLEKPPSSNTNSHGASGGGGGSGSASSSRSRTPLTVAQQKYKKGDVVCTPTGIRKKFNGK
QWRRLCSRDGCSKESQRRGYCSRHLSMRTKEMEASGGGRDRGGASSTGTLTPSDLRLGGG
RTSSEFDWDNTSRDSSEASSRGGDSRPRMVLPSFLPQDLSHFDFDECEAATMLVSLGSSR
SGTPSFSPISNQSPFSPTPSPSPSPLLSFRPATFSPITAPPSLTPRRHRHLSGTKMSTPG
SEREHHLSGIVPTFQTNLTFTVPMSPSKRKLDALPPPLPLPDQQLGETIGLRPAAFRVLS
PQSQPTTPSSLSFPRPRSATSRPPSSAASTPPPMLVSPTPPSPLPQDPSPRRIVPLRDSP
VIVRNPDVPLAKFTEGPLGRRGGGGCSSRDHSQPLHLATGLQAPVPINGAVTNGAVLMRN
PASTLVLVTSSQSLTPAVTGRPVHSSPAPSGGSASMSSTGSALSSSGSGGREWERKSGGH
QDAIGGTLPQPVACHPSPTALLPLILPAESPQPAPRKDIIMGRPGTVWTNVEPRSVPVFP
WHSLVPFLEPSQSSAAAQPTDGQQLVNQSNEPRCGVALVSDGRMGPPDAGSGSPSRPPPS
SNDNNPQAERAERGGADSETESDADDPFFLGVANDPALSTGTMKRRTQSLSALPKDGDRK
REKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPQEKQKYHDLAF
QVKEAHFRAHPDWKWCNKDRRKSISEGRGTPGAKEARERSMSESAEPESVSQGMELKGTA
GPGWPGGSEHHVGDYSGQLPRTRAFSYSAVHSLERRERARDVEKLCLEETGSFHSHPPTL
SLAQCGASEDVTSDEERMVICEEEGDDDVICEEEGDDDVMEDSCPEGSIDLKCKERVTDS
DEDEPDGQQAFQPVVRSSLPSSTNTSHADSHSDSTKGDTRGSAGESSERKRKRGMEGGEE
GSGESKRGRGGGGHVPSNSIPGSAPITSTPALGYGLTQVLGAVRMAPTVVTNMVCPITSM
PIPIASKPMEGSIALSALSGEKKAMLLIGGPGAGGGPFTAGGGYLSSSSSNSVSVGPGGL
QVTSLVLGGAFPNQSIQLIAPPQPLLNSTHSTLPFPLPLLQPQFLPAGSLTPPGGANPGL
TQVQYILPTLSSVSANPKTPSPQLTQQPTGVRTLPSTPPTHVSLANGIHSGAGVEIRYAT
VGGVSPGERVQAQSPVLQSKMLVPMATVRTGSTPPQPSCLVAPPLPVQNGALPGSKIIQI
APMPMVQTNVHSAGAVFPGSPFPVSMATATVMTSGITAPQTVLLTSPPTRITYVQSGTGG
VSTATVQAPPSSGPAYLPSSLTTLGFTAIAPAGQALVHPLVAGQPPWLAPALSPGAPGTG
RQLLTAIYPDQNVILAPDGVSMTSVPPNLAQEVSGQSSRSAVGVQGSKDVTLSHEEGMPH
LTAEMEHKPQVEDQAQRKTKTQIKKESIKKEKMTEDVEAHSKPGANSMGTSSSNTPTGSE
ENGGRASHVKEENTDDARDYAKEKQTDVDGERERWIKMECGTPEPERSRETDDWPHEGHN
KGDSGNEGHSKGAGPREPPHPPTGQDTPPPAPQTDRDAPPSAKKTKFRPPPLRKPSDSID
KVLSGSYFEERFAELPEFRPEEVLPSPTLQSLATSPRAILGSYRKKRRNSTDLDSSAEDP
SSPRRKTTARSRLSSCSSEPNTPKSDVKCEGDIFTFDRAVAESEDVLGEMDRVPYSSLRR
TLDQRRALVMQLFQEHGFFPSAQATAAFQARYSDTFPSKGCLQLKIREVRQKIMQTATPG
TPGISEPGGSTTGVPGSTDSTSAANGSSNTSTRDGTGTKPGERGRSPEEPRSLGKL
NT seq
7731 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgattaaaaagcaaggaaggcgctcgcccccgtcgacccgggccaaaggtggg
aagagacggggagcggtggacagtggggagaaaagagactcggacgagaacagagaccaa
tcccctaaaagtcagaccccaccccaaacctcatctcactcagagtcttctcaggaagag
tcgatgacacttacggctagggccacgccagagagggaggtccacagagaggggccccag
ctcccagagacagcggccgcagcagcagggtccctccctgggaagtcagaggactcccgc
ccggggagtgtcaagtcgctgagcgcccacagcacagacagcagcagcagcgccgccagt
gctgccaacagccccaacccctcgtccaaccgcaagacagccaccttcaaggcccgtgtc
cccaagaagaagtacacctctgagcactgtgctgctgcagctgctgccgccagcaaccac
ggataccatggcaaccccggcacgcccccactgaacagcagtagtgctcactgtggtagt
aacaccggtagtcagtcgtcgggcttatcttcggggcccgggtcgacggcgagtgatggc
ggtttgcttactgacatcaacagtcagaccaggagaccagtggaggactacattaccact
atagctccaccacaggacagggataacacacctggaccccctcccacaggggacagagac
aggagaggcccagagggaggcagagaaatctcccccagccctgtccgctgctcctctaca
gacacagccagcgaacacgaccctgacgtgagcgatctacgccgccccaactttccccac
accaaccccaacaccgaagcacacacactggacctggtgcaacgtagcaccccacgcact
ccgaccccacagagcctgtcggacgcgctagccgacgccctggcaaaaggtctaaagaac
cagcgggtgctagccaggcaggctaggaggagaactggaaagtgggaagaggagaacgga
aggggagtggggagggagagcatggactcggtgttccgagcgggtgtggtgcggcgggtg
agtggcgagcacggcagcctggaggtgcagctgaacggcgagaaggagctgtaccgctac
ccgtttcgcgagggcccccaggggcccgtggacatcatcatggacgccccgccgcccggc
tcccaggccgtgcccatcggcacccctgtgtgcgtgcccttcggaggcaacgaggacggc
ggcaccacagaggcccagcgccagtggtaccgagagggcctagtcacccaggtggactcc
cacccggctgtgtcctacccctatagagtgttgttagaggacagagcgcccccaggggat
gaggagggggatggcagggtgggcactccgaccgctgtgtgggtgtcccgtcagagcctc
cgcctgctggtgcccccctgggacctggacctgggaccctccggaggggggcgagaggag
ggtgatgctgccgccgagagggggagagagagggagagagagagagaggacagggacgaa
atagaagtggagccagagctgtgtttccccagccatgggatggggctcagcgcagctgtg
gctgggtctgtgttggggaggctttcataccctggaacggcccccgcctcctcgtcttcc
tccactgtcagctcccccgtcacccctgcctcggtgctgagtctggtgcccggaagagac
tgggagcgagagaaggacctggtggagagagagcgggagctccagaggaaacaagagaga
gataaccgagagagggccaagcagcatcaccacttcatgcccctgaccccagaggaggac
atagaggtgtcccacttcagcatggtgcccatgggggcggcgggaggtgcggccaaggcc
ctggcggtgtcccaacacaggcacatactctccaagccgcccccgggctacctcagcccc
cacctgtccgtggtccggggcctcggaggcaccccgctggtgggcccccacttggccctc
aacccccacccccctgcctcccccacagtgctaatgggcctggagtcgggagccctgtca
gcgggggcggccgtcatcgccacccctcagctccctctgccctcctcgtcctcccgcggc
tccctggaaaagccaccctcgtcaaacaccaactcccacggtgcatctggagggggtgga
ggctcgggttcggcgtcctcgtcgcgctcccgcacccctcttacggtggcccagcagaag
tacaagaagggcgacgtggtgtgtacccccacgggcatccgcaagaagttcaacggcaag
cagtggaggaggctgtgctccagagatggctgctctaaggagtcccagagaagaggctac
tgctcgcgtcatctctccatgagaactaaagagatggaggccagcggagggggcagagac
cgtggcggggccagcagtacgggcaccctaaccccgtcagacctgaggctgggcggcggc
cggaccagttcggagttcgactgggacaacacgtcgcgagacagcagcgaagcgagcagt
aggggaggggattcacgcccccgcatggtcctgccctcgttcctgccccaggacctatca
cacttcgactttgatgagtgcgaggcggccaccatgctggtgtctctgggcagctcccgc
tcgggcacgccctcattctctccgatctccaaccaatcgcccttctcgcccacgccgtcg
ccctcgccatccccgctcctcagcttccgcccagccaccttcagccccatcacggccccg
ccttctctcacccctcgccgccaccgccatctgagcgggactaagatgagcacgccgggc
tcggagcgcgagcaccacctgtcgggcatcgtacccaccttccagaccaaccttaccttc
accgtgcccatgagccccagcaagcgaaaactggatgcccttcctccgccactgcccctc
cccgaccagcaactaggggagactatagggctccggccagccgccttcagggtgctctcc
cctcagagccagcccaccaccccctcctcgctctccttcccccggccccggagcgccact
agccgccccccatcctccgccgcctccacccctccgcccatgctggtgtcccccacccct
ccctccccactgccccaggaccccagcccccgtcgcatcgtgcccctgcgagactccccc
gtcatcgtgaggaaccccgacgtccccctggccaagtttaccgagggacccttagggagg
aggggaggtgggggctgctcctcaagagaccacagccagcccctgcatcttgccaccggc
ctccaagcacccgtgcccatcaacggcgccgtcaccaatggagcggtcctcatgcgaaac
cccgcctccaccctagtccttgtaacctcctcccagtccctgaccccagccgtcacggga
cgccctgtccactccagcccagcccccagtggtggctccgcctcaatgtcctctactggc
tccgccctctctagctctggatcaggcggtagggagtgggagaggaagtctggagggcat
caggacgccattggagggacactgccccagccggtagcctgccacccctcgcccactgcc
ctgctgcccctcatcctaccagccgagtcccctcaacctgcaccccgcaaggacatcatc
atgggacggcccgggacagtatggaccaatgtggagccccggtcagtgccagtgtttcct
tggcattcattggtccctttcctggagcccagccaatcgagtgcggctgcccagcccact
gatggccaacagcttgtcaatcagagcaacgagcctcgttgtggggtggccctagtgagt
gacggacggatgggcccaccagatgcaggatcagggtctccatcccgcccaccgccctcc
tccaatgacaacaacccccaagctgaaagagcagaaagaggcggagccgacagcgagacg
gagagcgatgcagatgacccgttctttctgggtgtagcaaatgatcctgccctgtctaca
ggcactatgaagaggcggactcagtccctcagtgctcttccaaaagatggagacagaaag
agggaaaaggaccacattcggcggccaatgaacgcgttcatgatctttagcaagcgtcac
cgggcgctggtgcaccagaggcaccccaaccaggacaaccgcacggtcagcaagatcctg
ggcgagtggtggtatgccctggggccacaagagaagcagaagtaccacgacctcgccttc
caggtgaaggaggctcacttcagggcccacccagactggaagtggtgcaacaaggacagg
aggaagtctatctctgagggccgagggaccccgggggccaaagaggcacgcgagaggagc
atgtcggagagcgcagagcccgagtcagtgtctcagggcatggagttgaagggtacggca
ggcccgggctggcctgggggttctgagcatcatgtgggggactacagtggccagctccct
cgcacccgtgccttctcctatagtgcagtacacagcctggagaggagggagcgggccaga
gatgtggagaagttgtgcctagaagagaccggctcgttccacagccacccccctactctc
tccctggcacagtgtggggccagcgaggacgtgaccagcgacgaggagcgcatggttatc
tgtgaggaagagggggacgatgatgttatctgtgaggaagagggggacgatgatgtcatg
gaggactcgtgccctgaaggatccatagacctcaagtgtaaagagagagtgactgacagt
gacgaggatgagccggatggacagcaagccttccagccagtggtccgttcctctctcccc
tcctccaccaacacctcccacgctgactcccactccgactctaccaagggggacacaagg
gggagcgccggagagagctctgagaggaagagaaaacgagggatggagggaggagaagag
ggaagtggagaatccaaaagaggaaggggtggaggggggcacgttccttctaattccatc
cccggatcggcgcccatcacctcgacccctgctctgggttatggactcacccaggtgctc
ggtgcagtccggatggcccccaccgtggtgaccaacatggtatgccccatcaccagcatg
cccatccccatcgccagcaagccaatggaaggctccattgccctcagtgccctgtctggg
gagaagaaagccatgcttctgattggaggaccgggagcaggaggcgggcctttcacagca
gggggtgggtacttgtcctcgtcctcttcaaattccgtgagtgtggggccgggggggctg
caggtcaccagtctagtgctgggaggtgctttccccaaccagtctatacagcttatagcc
ccgcctcagcctctcttaaactccacccacagcaccctacctttccccctccccctgctg
cagccccagttccttcctgccggttctctcaccccccctggcggtgccaaccctggcctc
acccaggtgcagtatatcctgcccaccctgtcatctgtcagcgccaaccccaagaccccc
tccccccagctaacccagcagccaaccggcgtacgcacgctgccctccactccgcccaca
catgtctccctggccaatggaatacattcgggggcaggagtggaaataagatatgccaca
gtgggaggggtcagccctggagaaagagtccaagcccagtctccagtcttgcagagcaag
atgttggttcccatggcaacagtgagaactggctctactcctcctcagcccagctgcctg
gtggctcctccccttcctgtgcaaaatggtgctctaccaggaagcaagattatccagatc
gcccccatgccgatggtccagacaaatgtccactctgctggagcagtgtttcctgggagt
cccttccctgtatccatggcaacagccactgtgatgacttcgggcatcacagccccccag
accgtgttgctaacctcgcctccaacaaggatcacttatgtccaatcaggcaccggaggg
gtctccacggcaacagtccaggcccctccctcttcaggccccgcctacctgccatcgtcc
ctgactaccctgggcttcaccgccatcgccccggctggccaagcccttgtgcaccctctc
gtagcgggccaaccaccctggctagccccggccctttcccctggagccccggggactgga
cgtcaactcctcaccgccatttacccggaccagaacgtcatcctggcgccagatggggtt
tccatgacctctgtgccccccaatttggctcaagaagtgtccggccaatcatcacgctca
gctgtcggcgtccagggttcaaaggacgtgaccctgtcacatgaagagggaatgccacac
ctgactgcagagatggagcacaagccacaggtggaggaccaggcccaaaggaagaccaag
acacagataaagaaagagagcataaagaaagaaaagatgacagaggatgtcgaggcacat
agcaaacccggtgctaactcaatgggtacgtccagcagcaacacaccaacagggagtgaa
gaaaatggtggtcgagccagccacgtgaaagaagagaacacggacgatgccagagattat
gccaaagagaaacagacagacgtggatggagagagggagaggtggataaagatggaatgt
gggacacctgaaccagagaggtccagggagacagatgattggccccatgagggccacaac
aaaggggacagtggcaacgagggccacagcaaaggggctggaccgagggaacctccccac
cctcccacaggacaggacactcctccgcctgccccacagactgacagggacgcgcccccc
tcagccaagaagaccaaattccgccctccaccactcagaaagccctccgactccattgac
aaggtcctgtcggggtcctatttcgaggagcgctttgccgagctgccagagttcagacca
gaagaggtgctgccctctcccaccctccagagtctggccacttccccccgagccatactg
ggcagctaccggaagaagaggaggaactccacagacctggactcgtctgcagaggacccc
agctctcccaggaggaagactacagctcggagccgtctctccagctgcagctcagagccc
aacacacccaagagcgacgtcaagtgtgagggggacatcttcacctttgacagagctgtt
gctgagtctgaggatgtcttgggggagatggacagagtgccgtactcctctctccggagg
actctggaccagcgcagggctcttgtcatgcagctcttccaggaacatgggttcttccct
tcagcccaggccactgcagccttccaggcgcgctactcagacacctttccctcgaagggg
tgtctgcagctgaagatcagggaagtgaggcagaagatcatgcagacagccacacctgga
acccctggaatctctgagcctggcgggtcaacaacaggggtcccggggtcaacagactcc
acctccgccgccaacggctcctcaaatactagcactcgagatggtacagggacgaagccc
ggagaaagagggaggagtcccgaggagcccaggagtttgggtaaattgtag
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integrated database retrieval system
