KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139391708
Entry
139391708         CDS       T10872                                 
Name
(RefSeq) integrin alpha-8-like
  KO
K06584  integrin alpha 8
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04510  Focal adhesion
ocla04512  ECM-receptor interaction
ocla04514  Cell adhesion molecules
ocla04810  Regulation of actin cytoskeleton
ocla04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    139391708
   04514 Cell adhesion molecules
    139391708
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    139391708
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    139391708
   04810 Regulation of actin cytoskeleton
    139391708
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ocla04515]
    139391708
Cell adhesion molecules [BR:ocla04515]
 Integrins
  Integrin alpha subunits
   139391708
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha
Other DBs
NCBI-GeneID: 139391708
NCBI-ProteinID: XP_070995294
LinkDB
Position
3:25480713..25544209
AA seq 1056 aa
MCAYRMCTFGGMLCRVVSVLWLVLSVVSGFNLHAERPAVYGGPEGSYFGYAVDFYRPTPE
SSTLSVLVGAPKANTSQPGIIEGGAVYYCPYPPNPDSTKQPYSCTQIPFDNANNRMIKVN
GTREPLEFKSHQWFGASVRTHKGKVVACAPLYHWRTVKVNGEKDPVGTCYVAVQNFSAYA
EYSPCRTNDPDPEGQGFCQAGFSVDFTKEGTLVVGGPGSFYWQGQVMTAGVAEILNGYSL
KAVLRRVHGEKQTHAAADTHDDSYLGYSVAVGEFTGDSEQELIAGVPRGAQNFGYVAVIN
STNLTFIMNFTGEQMASYFGYSVAVTDLNGDGYDDVLVGAPLYMERERESKPKEVGRVYL
YLQHSPLTFSEPLLLTGTHTFGRFGTAIAPLGDLNQDGYNDVAVGCPFGGEDRSGLVLIY
NGQRDLTARGLTLSQELYGAWDSSSGLSGYGFTLRGDRDLDNNHYPDLIVGAFGKGEVSV
YRARPVVSVEAEMILTPRILNPDDRSCLLTESDTMVTCLRVDICAKVSGVGIPDSVVLNA
ELQLDWLKGVRGGVKRVNFLDSHQPQHTGVLTLGHSRPHSCLNYTVYLRGEDEFRDKLTP
ISLALNYSLAPPSNLDLPPVINRYSSTFLQEQAYILLDCGEDNECIPDLQLSASMDRTEL
VVGDDNLVMLTINAVNEGEGAYETELHTLLPPEADYIGVERRIESLSRLNCEYRMVNDSR
LVVCDLGNPMVAGTEVSVGLRFAVQRLDDAGPHIDFDLQIHSSNKDNSKSNPVSLSLSIS
ARAQLDLRGVCHPSQVVLPFPHWEPKEKPVKEDDVGPQVTHIYELHNSGPSSIREAELQV
GWPSRFRDEHLLYAMEVLTEGPISCRSNTSLNLLGLQMSSVQDTPELLGFLRNSSSPHRY
RRATSAAQPYSSKTLNCSNIICLRVLCVVGRLDRGQSAVVKIRSRLWAHTFLQRRNDPYL
LNSTVSFRVTALPYRLQPASLPQHTTSMGTLVLWGTPDVAFAVPLWVIILAILLGLLVLA
MLTLAMWKCGFFDRARLPADDVSDREQLTSDQLADA
NT seq 3171 nt   +upstreamnt  +downstreamnt
atgtgtgcttataggatgtgcacgttcggtgggatgttgtgtcgcgtggtgtcggtgctg
tggctggtcctttcggtggtctcggggttcaacctgcatgcggagcgcccggcggtgtac
ggaggaccagaggggagctactttggttacgccgtggacttctaccgaccgacccccgaa
agcagcacgttgagtgtgttggtgggagcgcccaaggccaacacatcccagccaggcatc
atagagggaggagctgtctactactgtccctatcccccaaaccccgactccaccaagcaa
ccctacagctgcacacagatacccttcgacaacgccaataacaggatgattaaggttaat
ggcaccagggagcctctggagttcaagtctcaccagtggtttggagcctcagttagaact
cacaaaggaaaagtggtggcctgtgctcctctctaccactggcgtactgtgaaggtgaac
ggtgagaaggacccggtaggaacctgctatgttgccgtgcagaactttagcgcctacgca
gaatactcaccctgtaggaccaatgatccagacccggagggacagggtttctgccaggcc
gggttcagtgtggacttcaccaaggaggggacactggtggtgggcggacctggaagcttc
tactggcaaggtcaggtgatgactgcaggcgtagcagagatattgaatggttactctctt
aaagccgtgctcaggagagtccatggagagaaacagacacacgctgcagctgatacccat
gacgacagctacctaggttactctgtggcagtgggggaattcacaggagactcagagcaa
gagctgatagctggggttccgagaggggcacagaactttggatatgtagctgtgattaac
tccactaatctgacattcatcatgaacttcacaggagagcagatggcttcctactttggc
tattctgtggctgttactgacctcaatggagacgggtatgatgatgtactggtaggagcc
cctctctacatggagagagagagggagagtaagcccaaggaggtgggccgtgtctacctg
tacctccagcactccccgctcaccttctccgagccccttctcctgacgggaacacacacc
tttggacgctttggcactgccatcgccccgctaggagacctcaaccaggacggatacaat
gacgtggcagtgggttgtccgtttggaggggaggaccggagtggcctggtgttgatctac
aatggccagagagacctgacggcccgcggcctaaccctcagccaggagctctatggagcc
tgggactccagtagtggcctctccggctacggcttcaccctgaggggggacagagacctg
gacaacaaccattaccctgatctgatagtgggagcatttggtaaaggggaggtgtcggtg
tacagggctcgtcctgtagtgtcagtggaggctgagatgatcctgactcctagaatcctg
aaccctgacgaccgatcctgcctcctgacagaatctgataccatggtaacctgtctcagg
gtagatatttgtgcgaaggtgagcggtgtggggatcccagactctgtagtcttgaatgca
gagctgcaactggattggctgaaaggtgtgaggggcggagtaaaaagagttaatttcctg
gattcccatcagccccagcacacaggggtcctaactcttggccacagccgtccacactcc
tgcctgaactacacggtctacctacgaggggaggatgaatttagggataaattgactccc
atctcattggctctgaactacagtttagcccctccttccaacctggacctcccccctgtc
atcaaccgctacagcagtaccttcctgcaggaacaggcgtatattctgctggactgtggg
gaagacaacgagtgtattccagacctccagctgtctgcaagcatggaccgtacagagctg
gtggtcggggatgacaacctggtcatgttgaccataaacgcggttaacgaaggagagggg
gcatatgagacagagctacacacactcctaccccctgaggctgattacataggagtggaa
cgcaggatagagtctctatccaggttgaactgtgagtacaggatggtgaatgactccaga
ctggtggtgtgtgacctggggaaccctatggttgctggaacagaagtatctgtaggttta
aggtttgctgtccaaaggctggatgatgccggtcctcacattgactttgacctacagatc
cacagttcaaacaaagacaactccaagagcaacccagtcagtctgtctctctccatctct
gccagagctcagctagacctgaggggggtgtgtcatccctctcaggtggttcttccgttt
cctcactgggagcccaaagagaagccggtcaaagaggatgacgtaggaccccaggtcaca
cacatctacgagctccataactcaggtcccagcagtattcgggaggcggagctccaggtg
ggctggccctctcgtttccgtgacgaacacctgctctatgctatggaggttctaacggaa
ggaccaatcagctgccggagcaacaccagcctcaacctcctgggcctacagatgtcctct
gtccaggacactccagaattgttgggctttctgagaaacagtagctctcctcaccgctac
agacgagccaccagcgctgcccagccctacagcagcaagaccctgaactgcagtaacatc
atttgtctaagagttctgtgtgtggtcgggcggttggaccggggtcagagcgctgtagtc
aagatccgctcccgactctgggctcacaccttcctccagagacgtaacgacccatacctc
ctcaactccaccgtgtccttcagagtgacggccctgccctatcgcctccagcccgcctcc
ttaccccaacacaccacttcaatgggtacactggtgctgtgggggactcctgatgtggcg
tttgctgttcctctgtgggtcatcatcctggccatcctactgggactgctggtcctggcc
atgctaacactggccatgtggaagtgtgggttctttgaccgagcacggctgccagcggat
gacgtgtcagatcgtgagcagctgacctctgaccaattagcagacgcctaa

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