Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139391719
Help
Entry
139391719 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase RING2-A-like
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
139391719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139391719
03036 Chromosome and associated proteins [BR:
ocla03036
]
139391719
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139391719
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139391719
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
139391719
Noncanonical PRC1 (PRC1.1)
139391719
Noncanonical PRC1 (PRC1.3/1.5)
139391719
Noncanonical PRC1 (PRC1.6)
139391719
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-Nse
zf-C3HC4_4
zf-RING_6
zf-RING_4
zf-RING_5
RING_XB3-XBAT31
zf-rbx1
zf-UDP
TRAF3_RING
zf-C3HC4_5
Zn_ribbon_Top1
Sina_RING
Motif
Other DBs
NCBI-GeneID:
139391719
NCBI-ProteinID:
XP_070995310
LinkDB
All DBs
Position
32:complement(31802130..31805572)
Genome browser
AA seq
381 aa
AA seq
DB search
MVTPVNIQNPSKTWELSLYELHRSPQEAIMDSTEIAVSPRSLHSELMCPICLDMLKNTMT
TKECLHRFCSDCIVTALRSGNKECPTCRKKLVSRRSLRRDSNFDALISKIYPSRDEYEAH
QDRALERLNQQHNNRILSSSIEEGLRMQALHRAQRVRKPAQESDNTTFSGGEDNGDTRSH
LSHDSAPSHVLLTPSHPPPEAGHTRNPKRPRESDGSVPEVDGGSPAPPVRRHKESPGSEI
ELVFRPHPLLVNTQDYSQTRYVKTTANATVDHLSKYLALRIALEDRQRDSQSDAGTEKEG
GAKGGDAAAEGASLKNISEKQYTIYIPTSGGQFSTLNGSLTLELVNEKYWKVRKPLELYY
APTKDQQLQPSQPKSPQPKEV
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggtgactccagtcaacatccaaaaccccagtaagacgtgggagctgagcttgtatgag
ctgcacaggagcccacaggaggcaatcatggacagcacagagatagcagtgtcccccagg
agcctccacagtgagctgatgtgccccatctgtctggacatgctgaagaacaccatgacc
accaaggagtgcctgcaccgcttctgctccgactgcatcgtcactgcactccgatcaggg
aacaaggaatgccccacgtgccgaaagaagctggtgtcgagacgctcattgcgccgtgac
tccaacttcgacgccctcatctcaaagatctaccccagccgggacgagtacgaggcccac
caggaccgggcgctggagagactcaaccaacagcacaacaatcggatactcagctccagc
atcgaggaggggctacgcatgcaggcacttcacagagcccagcgagtgcgcaaaccagcg
caggagagtgacaacacaaccttcagtggtggcgaggacaacggagacacacggtcacat
ctctcccacgattccgctccctcccatgtgctcctcaccccgagccaccccccccctgag
gccgggcacacccggaaccccaagcggcccagagaatcggacgggtcggtcccggaggtg
gatgggggcagccccgcgccaccagtccgccgccacaaagagagccccggctccgagatt
gagctggtgttccgcccacatcccctgctggttaacacacaggactacagccagaccagg
tatgtgaagaccacagccaatgcaacagtggaccacctgtctaagtacctggctctacgt
atcgctctggaggacagacaaagagacagccaatcagatgcagggacagagaaagagggg
ggtgctaaaggaggggacgcagcagcagaaggggccagcctgaagaatatcagtgagaaa
caatacaccatctacattcccacatcagggggccagttctctactctcaacggctccctg
actctggagctggtaaatgagaagtactggaaggtcagaaagcctctggagctctactat
gcccccaccaaggaccaacagcttcaaccatcacagccaaagtccccacaacccaaagag
gtgtga
DBGET
integrated database retrieval system
