Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139391755
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Entry
139391755 CDS
T10872
Name
(RefSeq) programmed cell death 6-interacting protein-like isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03250
Viral life cycle - HIV-1
ocla03272
Virion - Hepatitis viruses
ocla04144
Endocytosis
Brite
Membrane trafficking [BR:
ocla04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
139391755
Exosome [BR:
ocla04147
]
Exosomal proteins
Proteins found in most exosomes
139391755
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139391755
NCBI-ProteinID:
XP_070995385
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Position
32:complement(9470474..9504475)
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AA seq
887 aa
AA seq
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MATFISVPLKKSSEVDLVKPLSKFVTATYPAAEEQADYIRSVEELNKLRKSALGRPLDKH
ESSLEILLRYYDQLCAVEPKFPFSENQLCLTFTWKDAFDKGSLFGGSVKLALASLGYEKT
CVLFNGAALASQIASEQNLDSDEGLKAAAKYYQLASGAFGHIKDTVLSALNREPTMDISP
ETVGTLSLIMLAQAQEVFFLKATSDKMKDAIIAKLANQTADFYGDAFKQCQYKENLPKYF
YFQEVLPVLSAKHCIMQANAELHQSLLAKQKKRFGEEIARLQHATELVKTVASRYDEYVS
VKDLSDKISRALTAAKKDNDFIYHDRVPEVKDLEHIGKAALVKATTITPPLSAKFTDLFE
KMVPMAVQQSMSVYSQRKAETVNRLVGTMREATNLCNGVLASLNLPAALEDLSGDSIPQS
IVEKARAIVQQGGLQSIEQLIRDLPELLTRNREILEESLKMLGDEESTDSELRSKFSQRW
NRTPSGDLYKPLRAEGGNFRSVLDKAVQADQVVRERYNTHCEMIALLCKPEAELTAAIPS
ANPVKTLQGSEVVSVLRSQLAQLEEVKKEREGLEVEIKGVTFDMSSSFLTALAQDGAINE
EALSMSQLDQSYGSYSQRVQASLRSQEELLGKVQASHQEFSKLKKSNSEANDREEVLKKL
ASAHDSYVEITSNLREGTKFYNDLTEILLKFQNKCSDIIFARKTERDELLKDLQQSIARE
PSAPSFNVPAYQTNPAPTAADPTPAPRTVFQPQQPQVKAQPPQRPPPPAFTPQAASAPGN
PPDNQPQPGNPPPMAPPSQAQGPPYPTYQGYPGYAYQMPMGYNPYAAYGQYNMPPAMQPN
MQPYVPYQQAPAPGQGGFPGTPPTQQHPYTYQQQPQHPPHQPYYPQQ
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttttatttctgtcccgttaaagaagtcgtctgaagtagatctagttaaacca
ctttcgaaattcgtcacggcgacatacccagcggctgaggagcaagcggactacatccga
tccgtggaggagttgaacaagctgcgcaagagtgctctggggaggccgctcgacaaacac
gaaagctcactggaaatcctcctgaggtactatgaccagctgtgtgctgtggagcccaag
ttccccttctctgaaaaccagctgtgtttaaccttcacatggaaagatgcctttgataaa
ggctcactgttcgggggctcagtcaaactagccctcgccagtctgggatatgagaagacg
tgtgtgttgttcaacggagcagcgttggcgagtcagatcgcttcagaacagaacctggac
agcgacgaaggactgaaggccgcagccaaatactaccagttggcgagtggagcatttggt
cacattaaggacacagtgctgtcagctctgaacagagaacctactatggacatctctcct
gagactgtaggaaccctcagtctcatcatgctggcccaggcacaggaggtgttcttcctc
aaggctacgtccgataagatgaaggacgccatcatcgctaaactggcgaatcagacggca
gatttctacggtgacgccttcaagcagtgccagtacaaagagaacctgcccaagtatttc
tatttccaggaggtgctgccggtgctgtcagctaaacactgcatcatgcaggccaacgct
gaactgcaccagtctctcctcgccaagcagaagaaacgctttggagaggagatcgctcgc
ctacagcacgctacagagctggtgaagactgtagcgtctcgctatgacgagtacgtcagt
gtgaaggatttgagcgataagatcagccgcgctctgacggccgccaagaaggacaacgac
ttcatctaccacgaccgcgtccccgaggtcaaagatctggaacacattggcaaggcagcg
ctggtcaaggctaccaccatcacacctccactcagcgccaagttcactgacttgtttgag
aagatggtgcccatggctgtgcagcagagtatgagtgtgtacagccagaggaaggctgag
acggtcaacagactggtgggaaccatgagagaagctaccaacctctgcaacggtgtcctg
gcatctctgaacctgcctgcggctctggaggacctgtctggagattctatcccacaatcc
attgttgagaaggcccgtgccatcgtccagcagggggggctgcagagcatagagcagctg
atcagagatctgcctgaactacttacacgaaaccgagagatactggaggagtctctgaag
atgctgggtgatgaggagtcgacagacagcgagctgagatccaagttcagccaacgctgg
aacagaactccctctggagacctctataaaccactcagagcagaggggggtaacttccgc
agtgtgctggacaaggcagtgcaggcggaccaggtggtcagggagcgttataatacacac
tgtgagatgatcgctctgctctgtaaaccagaggcggaactcaccgctgccataccatca
gccaatcctgtgaagacactgcagggcagcgaggtggtgagtgtgttgcgttcccagctg
gcccagctagaggaagtgaagaaggagagggaggggttggaggtggagattaagggcgtg
acctttgacatgtcctccagcttcctgacggctctggctcaggacggggccatcaatgag
gaggcactgtcaatgagccagctggaccaatcatatggcagctacagccagagggttcag
gccagcctccgttctcaggaagagctgctgggcaaagtgcaggcgtctcaccaggagttc
tccaagctgaagaagtccaactcggaggctaatgatcgtgaggaggtgttgaagaagctg
gcctcagcccacgacagctacgtagagatcaccagcaacctccgagagggcaccaagttc
tacaacgacctcacagagatcctgctgaagttccagaacaagtgcagtgacatcatcttc
gcccgcaagacagaacgggacgaactgctcaaggacttgcagcagagcatcgccagggag
cccagcgccccgtcctttaatgtccccgcctaccagactaaccctgctcccactgccgcc
gacccaacccctgctcccaggactgtctttcagcctcagcagccccaggtgaaagcccag
ccgccccagcggccccctcctcctgccttcaccccccaggccgcctccgcgcctggtaac
cctccagacaaccagcctcaaccaggaaaccccccacccatggcccctccctcacaggca
cagggaccgccttaccccacctaccagggatacccagggtatgcctaccagatgcccatg
ggttataacccgtatgcagcgtacggccagtacaacatgccccccgctatgcagcctaac
atgcagccctacgtcccctatcagcaggccccagcacccggacaggggggcttccccggg
accccccccacacagcagcacccctacacctaccaacagcagccccagcacccaccacat
caaccatactacccacaacaataa
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