Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139391764
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Entry
139391764 CDS
T10872
Name
(RefSeq) gonadotropin-releasing hormone II receptor-like
KO
K04280
gonadotropin-releasing hormone receptor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04080
Neuroactive ligand-receptor interaction
ocla04081
Hormone signaling
ocla04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139391764
04081 Hormone signaling
139391764
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
139391764
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ocla04030
]
139391764
G protein-coupled receptors [BR:
ocla04030
]
Rhodopsin family
Peptide
Gonadotropin-releasing hormone (GnRH)
139391764
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
DUF6264
Motif
Other DBs
NCBI-GeneID:
139391764
NCBI-ProteinID:
XP_070995399
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Position
32:complement(27995951..28012364)
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AA seq
385 aa
AA seq
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MSDDRMLGNLTLWSATPMFPPENSSFNSSLPPSFTDWEAPTFTAAARVRVAATMVLFVFA
AFSNLSVLISVARGRGRRLAAHLRPLIASLASADLVMTFVVMPLDAVWNVTVQWYAGDTM
CKLLCFLKLFAMHSSAFILVVVSLDRHHAILHPLDTLDAGRRNKRMLLVAWVLSLLLASP
QLFIFRAIKAEGVEFTQCVTHGSFHHRWQETVYNMFHFVTLYVFPLLVMSFCYTRILIEI
SRQMHKGKGGEPCLRRSGADMIPKARMKTLKMTIVIVASFVICWTPYYLLGIWYWFQPAM
LQETPEYVHHALFVFGNLNTCCDPVIYGFYTPSFRADLADVVACCCRSQNISPRSLDRLA
CQRGRASREAESDNPSGDQPSGNLG
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgacaggatgttgggaaacttgactctttggtcggcgacgccaatgttcccg
ccagagaactcctcctttaactcctccctccctccgtcattcacggactgggaggcaccc
actttcaccgccgctgcccgcgtccgcgtggccgccaccatggtcctcttcgtgttcgct
gccttctccaacctctccgtgctgatcagcgtggcacggggccgcgggcgccgcctggcc
gcccatctccggccactcattgccagcctggcgtctgcagacctggtgatgacgttcgtg
gtaatgccgctggacgcggtgtggaacgtcaccgtacagtggtatgccggtgataccatg
tgcaagctgctgtgcttcctcaaactgtttgccatgcactcgtctgccttcatcctggtg
gtggtcagcctggaccgtcaccatgctatcctgcacccgttggacacgctggatgctggg
cgaaggaacaagaggatgctgctcgttgcctgggtcctcagcctgctcctggcctcccca
cagctgttcatttttcgagcgatcaaagccgagggagtggaattcactcagtgtgtgacg
catggaagcttccaccatcgctggcaagagacggtctacaacatgttccactttgtcacg
ctttacgtgttccccctgttagtaatgagcttctgctatacccgcatcctcatcgagatc
agccgtcagatgcacaagggcaaaggtggggagccgtgcctgaggcgaagtggtgctgac
atgatccccaaggcgcgaatgaagaccctgaagatgaccattgtgattgtggcatccttc
gtgatttgctggacgccatactacctcctaggcatctggtactggttccagccagccatg
ctccaggagacacccgagtacgtccaccacgcccttttcgtcttcggcaacctcaacaca
tgttgcgacccagtgatctacggcttctacacgccctccttccgggccgacctggctgat
gtggtcgcctgctgctgccgatcgcagaacatctccccgaggtccttggaccgcctggcg
tgtcagaggggcagggcaagcagagaggcagagtctgacaatcccagtggcgaccagcca
agtggaaacctcgggtag
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