Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139391775
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Entry
139391775 CDS
T10872
Name
(RefSeq) vacuolar protein sorting-associated protein 45-like
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139391775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139391775
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
139391775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
139391775
NCBI-ProteinID:
XP_070995420
LinkDB
All DBs
Position
32:complement(30405897..30426677)
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AA seq
569 aa
AA seq
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MNVTLAVKQYISKMIENSGPGMKVLLMDKETTSIVSVVYTQSEILQKEVYLFERIDSQNR
DNMKHLKAICFLRPTKENVENLIQELRRPKYSVYFIYFSNVISKSEIKALAEADEQEVVA
EVQEFYGDFIAVNPHLFSLNLSGVARGRSWEPTLLPRTTQGLTSVLLALKKCPMIRYQLS
SDMAKRLGESVKQIITKEYELFDFRKTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELL
GLNNNRIDLSRVPGISKDLKEVVLSAENDEFYANNLYLNFGEIGTNIKNLMEDFQKKKPK
EQQKLESISDMKAFVDNYPQFKKMSGTVSKHVTVVGELSRLVSERQLMEVSELEQELACQ
NDHSSASQNVRRLLQNPRVSEMDAVRLVMLYALRYERHSSSILPGLMEELNRKGVSEKHC
RMVTSMVEYGGKRVRGSDLVNPQDAVAITKQFFKGLKGVENVYTQHAPLLQETLDQLIKG
RLKDTNFPYLGPSSLRDRPQDIIVFVIGGATYEEALAIYNLNRTVPGIRIVLGGTTIHNT
KSFLEEVSLTAGAGQAERLQRAGGHPNRR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgacacttgctgtcaagcagtatatatccaaaatgatagaaaacagcggacca
gggatgaaggttctgctcatggataaagagacgaccagcatcgtcagtgtggtctacact
caatctgagatactacagaaggaggtctacctgttcgaaagaatcgactcgcagaatcga
gacaacatgaagcacctcaaagccatctgcttcctcaggccaaccaaggagaatgtggaa
aatctgatacaggagctccggcgacccaagtacagtgtctacttcatctacttcagcaac
gtcatcagtaagagtgagataaaagccctggccgaggcggatgaacaggaggtggtcgca
gaagtgcaggagttctatggagacttcattgctgtgaacccacaccttttctccctcaac
ctcagtggtgtggcaaggggtcgtagctgggagccaactctcctgccacgtaccacccag
ggtctgacctcggtgctgctggccctgaaaaaatgtcccatgatccgctaccagctgtcc
tcagacatggccaagcgactgggagagagcgtaaagcaaataatcaccaaggagtatgag
ctgtttgacttcaggaagacagaggtgcctcctctcctgctcatcttggaccgcagcgat
gacgccatcaccccactactcaaccagtggacgtaccaggccatggtgcacgagctgctt
ggcctcaacaacaaccgcattgacctgtccagagtcccagggatcagcaaggacctgaag
gaggtggtgctatctgcagagaacgatgagttctatgccaataatctgtacctgaacttt
ggagagattggcacaaacatcaagaacctgatggaggactttcagaagaagaagcccaag
gagcaacagaagctggagtccatctctgatatgaaggcgtttgtagacaactacccccag
ttcaaaaagatgtcgggtacagtgtcgaagcacgtgactgtggtgggcgagctgtctcgc
ctggtgagcgagaggcagctgatggaggtgtcagagctggagcaggagctggcctgccag
aatgaccactcaagcgcatcacagaacgtgcgtcggctgctgcagaacccgcgggtgagc
gagatggacgcggttcgcctggtgatgctgtacgcactgcgctacgagagacacagtagc
agcatcctgccgggcctcatggaggagctcaacaggaagggcgtgtcagagaagcattgc
aggatggtaacgtccatggtggagtatggagggaagagggtgagaggaagtgacctcgtc
aacccccaagatgcagtcgccatcaccaaacagttcttcaaggggctgaagggagttgag
aatgtgtacacgcagcatgcaccgttactgcaggagaccttggaccagctgattaagggg
cggctgaaggacactaatttcccctacttaggacccagctcccttagagacaggccacag
gatatcatagtctttgtcatcggaggggccacctatgaggaggcactggcgatctataac
ctgaaccgcaccgtgcctgggattcggatcgtactgggcggcaccaccatccacaacacc
aagagcttcctggaggaggtgtcattgacggcgggtgcaggccaggccgagaggctgcag
agggcgggtggtcatccaaacagacgctga
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