Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139391823
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Entry
139391823 CDS
T10872
Name
(RefSeq) DENN domain-containing protein 4B-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139391823
Membrane trafficking [BR:
ocla04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
139391823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
DUF4616
ARM_UBP24_USP9X-Y
SPA
Motif
Other DBs
NCBI-GeneID:
139391823
NCBI-ProteinID:
XP_070995497
LinkDB
All DBs
Position
3:complement(26009537..26045371)
Genome browser
AA seq
1497 aa
AA seq
DB search
MTEEKCPQLVDYFVVAGLAPGGSAPLDEEGQQRGGRVVEPVIDLAVIARGLGEEVPEGFT
CIEKTQGGHPAGLSAGLINNPHMYLCYRRGHDKPPILDLGVLYEGKEVVKQGWNVIETTP
YSRSASLSSGGPATHRTFLTYRRAPESQALHTLGVTDISLLLPSKGEVAPHTFCRVEKNL
NTGIWGPALYLCYKRAVAKANALVYEAGLISRYPEADVESFPLPESVPMFCLPMGVTVES
WPLNTKYQLPVFSTFVLTSACGDKVYGAAIQFYEAFPRECLSERQSVRLGLVSVVDRRPI
TNRTLQVKKSVCVLSHWPFFTVFQKFLTFVYRYSISGPHVLPLEKHISSFMHNVPFPSPQ
RPRILVQLSPYDNLLLCQPVSSPLLLSGASFVKLLQNLGPENACVLLLAVLTEHKLLLHS
LRPDVLTSVSEALVSMTFPLRWHCPYIPLCPLRLADVLCAPMPFIVGVHSSYFDLYDPPT
DVVCVDLDTNTIFQAEDKKPLSWRSLPRKQGKMLVNTLTNLMKTLEKIYTTGQEEATLEF
LLTDYDLIYGRQKQLELEIQEAFLRFMSCLLRGYRAYLLPITQAPSDRTTDCSSLFNLQG
FLKSRERTHQKFYTQLTRTQMFTQFIEECSFVSDRHACLEFFDECVQKQSDVEKPEEVRL
IDLDEAHSGEHTVFIMPPEEPQEPDGSECPTHYSYETFPVLCMDLFDRPQDQLRVPTKGS
APSSPAPRRTKQEIKLAQKRAQIYSAVPDMWSKCLLGHCYGLWFIYLPTFVRAESAKVRA
LQTAYEVLKHMETRKVVLPDEVCYRILMQLCGQYGQPVLAVRVLLEMKKAGITPNTITYA
YYNKAVLESKWPSTNQGGRLRWAKLRNVLMAVAQFRQPIKQRLKSGSVRSRTDTMDSNQR
SRPQSNLIRQSSWSGLSESSSHESLTGSMVKSNSLNSMRGSTHKSKLSMKAVLRNPGANG
CSDPASRKPPVGPRDTSTPSPFPPGGVLVRRDQVCLSNFYKDCAETTVSDPNCSCQPEER
DGRPPGPRDTVSRKAVDENYNNVSPQSRGSLAGKLQQLLTPTRHRVSGRRATSVDARRSG
GENGPVRRVSEQRPSRKAQVAESLLKAKERLYTATSESSLSVGSDVDLPETTNLAFPLRK
SWDTNQEGAGLEVLMSSCSLCRSCNSLVYDEEIMAGWTSDDSNLNSSCPFCSTTFVPLLN
AEICDLGPVSSLERTNWNMDEEVDSAAKSPGDLEAILGHNGVSEDSSSETSSYSESSSAT
MGSSVGGSPQVTVAYLSPLVLRKELESLLENEGEAVLSQGQLLDSHSIIFWNMVWYFHRL
GLPSNLLQLVRSSPLANQLAQTSENSAVRVRLLWDTLTPDTDYWPPLYILWRIHSGVPMR
NHSWRRHNHPFTLAFLEEVLRWVGMNEVHKGITLFLETIAKQPGTPKIQRSLYREMLFLT
LAAMGRDHVAAFDKKYKAAYQRLSGSLGREELRRKRAQPPSPKAVDCRRSFLLPLEC
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggagaaatgcccccagctagtggactactttgtggtggcagggttggctccg
gggggctcggccccactggacgaagagggccagcagagagggggccgggtggtggagccg
gtcatagacctggcggtgatcgcccggggcttgggggaggaggtgcccgagggcttcacc
tgcatcgagaagacccaggggggccacccggccgggctgagcgccggactcatcaacaac
ccccacatgtacctgtgttaccgccgtgggcatgacaagccacccatccttgacctcggg
gtgctgtacgagggcaaagaggtggtgaagcagggctggaatgtgatcgagaccactccc
tacagccgctcagccagcctgagctccggggggcctgccacccaccgcaccttcctgacc
taccgccgggccccagagtcccaggccctccacaccctgggggtcacagacatctccctc
ctgctgcccagcaagggggaggtggccccccacaccttctgccgggtggagaagaacctc
aacactggcatatggggtccagccttatacctgtgctacaagagagctgtagccaaagcc
aacgccctagtctatgaagcaggtctgatcagtcggtatcctgaagcggacgtggagtcg
ttccccctgccagagtctgtgcctatgttctgtctgcccatgggtgtgacggtggagagc
tggcccctcaacaccaagtaccagctccctgtcttctctaccttcgtcctcaccagcgcc
tgtggcgacaaggtttacggtgctgccatccagttctacgaggcgttcccacgggagtgc
ctctcggagcggcagagcgtccgtctgggcctggtgagcgtggtggaccggcggcctatc
accaaccgcaccctgcaagtgaagaagagcgtgtgtgttctctcccactggcccttcttc
accgtcttccagaagttcctcaccttcgtctaccgatactccatctccggaccccacgtg
ctgccacttgagaagcacatctccagcttcatgcacaacgtcccgttcccctcccctcag
cgacctcgcatcctagtgcagctctccccctatgacaaccttctcctctgtcagcctgtc
tcctcccccttactgctcagtggtgccagctttgtgaagctgctgcagaacctgggccct
gagaacgcctgtgtcctgctgctggctgtgctgacggagcacaaactactgctacactcc
ctccgccccgacgttctcacctccgtcagcgaggccctggtatctatgacgttccctctg
cgttggcactgcccgtacatacccctgtgcccgctgcggctggcagacgtactgtgtgcc
cccatgcccttcattgtgggcgtccactccagctactttgacctctatgacccccctact
gacgtggtgtgtgttgacctggacaccaacaccatctttcaagcagaggacaagaagccg
ttgtcatggcgatcactaccaaggaagcaaggcaagatgctggtgaataccctcaccaac
ttgatgaagacactggagaaaatctacaccactggccaagaggaagccaccctggagttc
ctgctgacggactatgacctgatctacgggcgtcagaaacagctggagctggagatccag
gaggccttcctgcgtttcatgagctgcctgctcaggggctaccgcgcctacctgctgccc
atcacccaggccccttcagacaggactaccgactgcagctccctcttcaacctgcagggc
ttcctgaagtctcgtgaacgcacccaccagaagttctacacccagctgaccaggacccag
atgttcactcagttcatcgaggagtgctccttcgtcagtgatcgccatgcctgtctggag
ttcttcgacgagtgtgtccagaagcagtcggatgtggagaagcctgaggaggtgcgtctg
atagacctggacgaggcccacagtggggagcacacggtcttcatcatgcccccagaggaa
ccccaggagccagacggttcagagtgccccactcactacagctatgagacattccctgtg
ctctgcatggatctttttgaccggcctcaggaccagctacgtgtccctaccaaggggagt
gccccgagcagccctgccccacgacggactaaacaggagattaagctggcacagaagcgg
gcacagatatactcggcagtgcccgacatgtggtccaaatgcctgctgggccactgctat
gggctgtggttcatatacctgcccacctttgtgcgggcggagagtgcaaaggtgcgtgcc
ttgcaaacggcatatgaggtgctcaagcacatggagaccaggaaggtggtactaccagat
gaggtgtgttacaggatcctgatgcagctgtgtgggcagtacgggcagcctgtgctcgct
gttagggtacttctggagatgaagaaagctgggatcacacccaacaccatcacctatgca
tactacaacaaggcagtgctggagagcaagtggccctccaccaatcagggtggccgtctg
cgctgggccaagttgcgtaacgttctgatggccgtggcgcagttcagacagccaatcaaa
caacggctgaagagtggttcagtacgctcgcggacagatacaatggacagtaaccaacgg
tcccgcccacaatctaacctgattcgtcagtccagctggagcggcctgagtgagagctcc
agccacgaatcgctgacggggtctatggtgaagagcaacagcctgaacagcatgagaggc
tcaacacacaagtctaagctctcaatgaaggcggtgctccggaacccaggtgccaatggc
tgcagcgatcccgcctcccgtaaaccccccgtggggccacgagacacctccaccccttct
ccctttccccctggtggtgtcctggtgcgccgcgaccaggtgtgcctgtccaacttctac
aaagactgtgccgagacgaccgtctctgaccccaactgcagctgccagcctgaggagaga
gacggcaggccacctgggccgagagacaccgtgagccgcaaggccgtggacgagaactac
aataatgtgtcaccgcagagtcggggaagcctggcagggaaactacagcagctgctcaca
cctactcgccatcgagtctcggggcggcgggccacaagtgtagacgctcggcgctcgggg
ggtgaaaacgggccggtgcgcagggtgtcggaacagaggccgtcccgaaaagcccaggtg
gctgagagcctgttgaaggctaaggagaggctctacactgctacctctgagagttctctg
tcggtggggagtgacgtcgacctccctgaaacaaccaatttggcctttcctctccgcaag
tcctgggacaccaaccaagagggagcaggactagaggtgttgatgtcgagctgctccctg
tgtcggagctgtaactccctggtctatgatgaggagataatggccgggtggacgtctgac
gactccaacctcaactccagctgtcccttctgctcgaccaccttcgtcccccttctcaac
gctgagatctgtgacctaggacctgtcagcagcctggaacgtaccaattggaacatggac
gaggaggtggatagcgcagccaagtcccctggtgacctggaggccatcctgggtcacaac
ggtgtgagtgaggactccagctctgagaccagcagttattctgaaagcagcagcgctacc
atgggatcatcggtgggcgggtcgccccaggtgacggtggcctacctgagcccattggtg
ctgcgcaaggagcttgagagcctgctggagaacgagggtgaggcggtgctgtcgcagggc
cagctcctggacagccactccatcatcttctggaacatggtttggtacttccatcgcctg
ggcctgcccagcaatctgctgcagcttgttcgctcctcaccgctggccaaccaactagca
cagacttcagagaactcagcagtgagggtgaggctgctgtgggacacactgacccctgac
acagactactggccccccctctacatcctgtggaggatacacagtggcgtacccatgcgg
aaccacagctggcggaggcacaaccaccccttcaccctggccttcctggaggaagtgctg
cgctgggtcggcatgaacgaggtacacaagggaatcactctcttcctggaaaccattgcc
aagcaaccaggcacgcccaagatacaaaggagtctgtacagagagatgctcttcctcacg
ctggctgccatgggtagagatcacgttgctgcgtttgataagaaatacaaggctgcgtac
caacggctgagtggctccttgggccgcgaggagctccgcaggaagagagcccagccacct
agccccaaggctgtggactgcagacggagcttccttctgccccttgagtgctaa
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