Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139391876
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Entry
139391876 CDS
T10872
Name
(RefSeq) iroquois-class homeodomain protein irx-1-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139391876
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
139391876
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
139391876
NCBI-ProteinID:
XP_070995588
LinkDB
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Position
32:complement(21756358..21760296)
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AA seq
457 aa
AA seq
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MSFSQLGYSQFLSGSQEVYGGDLAGLGRDGAADGGVNQAATAAAVSSMLGMYGNPWAAQN
YSAFLPYSGADLALISQMNPQYDLKDSPGAHPGGLAVHASAGFYPYGQYGYGDPNRAKAA
TRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWG
RSAEDRDGRIFSSDNEDEPDKHGSEDEEEEEIDLESIDIDKVEENPGDQREVEGEGKLAA
RDASDSGSLESQRTMSVKALRSMEGPIALIKAPVGACKNAVDLSPNAPVCQRPPQNKPKI
WSLAETATSPDSSIKPSPAVSIPHQATIPSHHPALLPGHGIYTCQIGKQLHNWANAAFLS
ANSLLGVRSLLGAANPAGHHMPLHGALNHQDARLTQASGASCTEEESGDESLESFSPKRD
DDVNIRRSGSPKSPFQLITDRSHHGTAQRALSTISTI
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctcgcagctggggtactcccagtttctaagtggctcccaggaggtttacggg
ggcgacctggccggcttaggccgggatggagccgcggatggcggcgtgaatcaggcagct
actgccgctgctgttagctcgatgctggggatgtatggtaacccgtgggcggctcagaac
tacagcgcgtttctcccctacagcggtgcagacctcgccctcatatcgcaaatgaaccct
cagtacgatctgaaggacagcccaggagctcacccgggaggtctggctgtccacgccagc
gcagggttctacccatacggccagtatggctatggcgacccgaaccgagccaaggccgct
acgagggagaccaccagcactctgaaggcctggttgcaggaacaccagaagaacccgtac
cccaccaagggagaaaagatcatgctggccatcatcaccaagatgacactcacacaggtg
tccacgtggttcgccaacgcgcgccggcgtctgaagaaggagaacaaggtgacgtggggc
cgcagcgcggaggaccgggatggacggatcttcagcagcgacaatgaggacgagcctgac
aaacacgggagcgaggatgaagaggaggaggagatcgatttagaaagtatcgacatcgat
aaagtcgaggagaacccaggagatcagagggaagtggagggagagggcaagctggccgcc
agggacgcatctgattctggtagcttggagagccagaggacgatgtctgtcaaggccctc
agaagtatggaggggcctattgctctcattaaggctcctgttggtgcttgtaaaaacgct
gtggatctttcccccaatgcaccggtgtgtcagaggcccccacagaacaaacccaaaatc
tggtctctggcggagacggccacaagccccgacagttccatcaaaccttccccggctgtc
tcgattcctcaccaggccacgatcccctcccaccacccggccctactcccgggtcatgga
atatacacatgccagatcgggaagcagctccacaactgggccaacgcggcgttcctcagc
gccaactctctgctgggtgtcaggtcgcttctcggcgcggcaaacccagccggacaccac
atgcctctccatggcgcgctgaaccatcaggacgcacggttgacgcaggcctcaggggca
tcgtgcacagaggaggagagtggagatgagtcgttggagagcttcagtccaaagcgagat
gatgacgtgaatattcgcaggtctggctcgccgaagtctcccttccagctgattactgac
agatctcaccacggaacggcgcagcgggccctctcgacaatttccacaatatga
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