Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392010
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Entry
139392010 CDS
T10872
Name
(RefSeq) insulin-like growth factor 2 mRNA-binding protein 3 isoform X1
KO
K13197
insulin-like growth factor 2 mRNA-binding protein 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139392010
03041 Spliceosome [BR:
ocla03041
]
139392010
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
139392010
Spliceosome [BR:
ocla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
139392010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH-I_KHDC4-BBP
KH_2
RRM_1
KH_PNO1_2nd
KH_NusA_2nd
KH_NusA_1st
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
139392010
NCBI-ProteinID:
XP_070995746
LinkDB
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Position
32:14254658..14289310
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AA seq
629 aa
AA seq
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MNKLYIGNVSEEASAEDLETIFEQWKIPHSGPFLIKTGYAFVDCPDEKIAMMAIDILSGK
VELHGKLIEVEHSVPKRQRSCKLQIRNIPPHLQWEVLDGMLAQYGTVENCEQVNTDTDTA
VVNVRYGAKDQARQALEKLNGFLMENFALKVSYIPDETAAAAAPTLGGGKRGFVPRGPLQ
SGSPGLGARPKLQSDVPLRILVPTQFVGAIIGKEGATIRNVTKQTHSKIDIHRKENAGAA
EKPITVHSTPEGCSNACRTIMEIMQKEALDTKFTEEIPLKILAHNNFVGRLIGKEGRNLK
KIEVDTETKITISPLQDLTLYNPERTITVKGSIEACSRAEEEVMKKVRESYENDVAAMNL
QSNLIPGLNLNALGLFPGGAPGMGPSMGHNAPPPGAQGGYSSFGSSYFGGEGPFWASVLS
ASSQPLSGQGQPESETVHLFIPALAVGALIGKQGQHIKQLSRYAGASIKISADEVRVVDA
NQVAPPDGMDAKQRMVIIAGPPEAQFKAQGRIFGKLKEENFFGPKEEVKLEAHIKVPSFA
AGRVIGKGGKTVNELQNLTSAEVVVPRDQTPDENDQVIVKITGHFYASQLAQRKIQEILS
HVRRQQQPKPSPRGEGPPRGDGLARPSRK
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaataagctgtacattggaaacgtgagtgaagaggcgagtgccgaggacttggaaact
atctttgagcagtggaagattccgcacagtggtccgtttctcatcaaaactggttatgct
ttcgtggattgccccgatgaaaagatagcaatgatggccatcgacattctttcaggtaaa
gttgaactacatggaaaactcatagaagtggagcactcggtccctaaacgtcaaaggagc
tgtaagctgcagatcaggaacatcccgcctcatctgcagtgggaggttctggatggcatg
ttggctcagtatggcacagtggagaactgcgagcaagtaaatacagacacagacacggca
gtggtcaacgttcgatacggtgccaaggaccaggccagacaggcgttggaaaagctgaat
ggcttcctgatggagaactttgccctgaaggtgtcgtacatccctgacgagacggcggct
gctgccgccccgaccctgggagggggtaagaggggctttgtcccccgtggccctctgcaa
tcgggttccccaggcctgggggcgcgccccaaactgcagtcggacgtccctttgcgcata
ctcgtccccacacagttcgtaggagccatcatcggcaaggaaggagccacgattcgcaat
gtcacaaaacagacacactcaaagatcgacatccacagaaaggagaatgcgggagcagca
gagaagcccatcacggtccactccaccccagagggctgctccaatgcctgcaggaccatc
atggagatcatgcagaaggaggccctcgacaccaagtttactgaggagattccattgaag
attctggctcacaacaactttgtgggccgactaatcgggaaggaaggacggaacctaaaa
aagattgaagtggacacagagaccaagatcaccatctcccctctccaggacctgacgctg
tacaaccctgagaggaccatcacagtgaaggggtccatcgaggcgtgctcccgcgctgag
gaggaagtgatgaagaaggtcagggagtcgtatgagaacgacgtggccgcaatgaacctc
cagtctaacctgattccaggactcaacctgaatgccttgggtttgttccctggtggtgct
ccaggtatgggcccctccatgggacacaacgccccacctcccggtgcccagggtggctat
tcctccttcgggagcagttacttcgggggcgaagggccattttgggcgtctgtgctgtca
gcgagcagccagcccctctctggccaggggcagccggagtctgagacggtccatctgttc
atcccggcgctggcggtcggagcgctcatcggaaaacagggtcaacacatcaagcagctg
tcgcgctacgccggagcctccatcaagatcagtgcagatgaagtccgtgtcgtagatgca
aaccaggtagcacctccagacggcatggacgccaagcagaggatggtgattatcgcggga
ccaccagaggcccagttcaaggctcagggtcgtatctttgggaagctaaaggaggagaac
ttctttgggccgaaggaggaggtgaaactggaggctcacatcaaggtgccctccttcgct
gctgggcgtgtcatcggcaagggaggcaaaacggtgaatgagctgcagaacctgaccagt
gctgaggtggtggtccccagagaccagacgcctgatgagaatgaccaggtcatcgtcaaa
atcactggtcacttctatgcaagccagctggcccagaggaagatccaggagatattgtcc
catgtgaggcggcaacaacagccaaaaccctcgccccgtggggaggggccgccccgtggg
gacgggctcgcccggccctcccggaagtag
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