Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392090
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Entry
139392090 CDS
T10872
Name
(RefSeq) vesicle-associated membrane protein 2-like
KO
K13504
vesicle-associated membrane protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04130
SNARE interactions in vesicular transport
ocla04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
139392090
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
139392090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139392090
Membrane trafficking [BR:
ocla04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
139392090
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
139392090
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Synaptobrevin
SpoIIM
MCU
PRIMA1
Tuftelin_like
TMEM214
Orf78
UL42
Motif
Other DBs
NCBI-GeneID:
139392090
NCBI-ProteinID:
XP_070995910
LinkDB
All DBs
Position
32:complement(33097760..33104561)
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AA seq
115 aa
AA seq
DB search
MSTTDAGTPGAPEGEGGPPAPAPNLTSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQRLS
ELDDRADALQAGASQFESSAAKLKNKYWWKNLKMMIIMAIIGVICVGVVFLYFYY
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccacagacgcaggaaccccgggggcccctgagggagaagggggtcccccagcc
ccagcccccaacctcaccagtaaccgacgactgcagcagacgcaggcacaggtggacgag
gtagtggacataatgcgtgtgaacgtggacaaggtgttggagagggatcagagactgtcg
gagctggacgacagggccgatgctttgcaggccggggcctcacagtttgagagcagcgct
gccaagcttaagaacaagtactggtggaaaaacctcaagatgatgattataatggcaatc
ataggagtcatatgtgttggagttgtgttcttgtatttctattattga
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