Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392136
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Entry
139392136 CDS
T10872
Name
(RefSeq) perforin-1
KO
K07818
perforin 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
139392136
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Motif
Pfam:
MACPF
C2
EGF_PRF1
Motif
Other DBs
NCBI-GeneID:
139392136
NCBI-ProteinID:
XP_070995968
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Position
32:29809829..29812401
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AA seq
589 aa
AA seq
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MRVMKELCLLLLICWAGTLQCLAGSLRGKIPGKPQECEQAEFVPGYNLAGEGFDIVKMQR
KGSYVINMENWEREGDTCELAVNFYLGGIKQKLPAAMANWRALTDCKREVSSSIYESSES
LINTTTSAVTNNWKLGLDLEIPEVKFKTIIGGTDSREATYAIAKSKQDRYSFTRHEVHCS
IYRYSLVEDPPLHKQFLNSVKKLPTVYDLKSKPAYRNLIDTYGTHFTSQVNLGGKVSAVT
SIKSCQATMNGVTVTAVKDCLDVEASLSYQFSASLAAELHYCNELKKKLGTNRSFSSMFS
DRHLEIKGGVLNGGDLLFSGALDANAYKEWLESLKTIPDVVHYFLKPLHFLLKSRHPAQP
GLKKAVEEYILENALIKKCSESCQIGTRTSKRDHCACVCHSDQSIKSNCCPAGKGLARLQ
VYGLRAKGLYGDISTETDGFVEISYDKQVKLTEVIKDDDNPVWPESFEFGPIHINFDTKL
TFKVYDTDRVVWNKDVLGECSFDLRRGNVSDVCVFKYGTFFFSYTVQCAPSLGGSRCEEY
IPSPMSASLAKVFHSRNGMLAGENWRLELGRNHTNDAVDKVGLKRCHGE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgatgaaggagttgtgtctacttctactgatctgctgggcaggcacactccag
tgcctggcagggagtttgaggggaaagattcctggcaagccacaggaatgtgagcaggcc
gagtttgtccctggttacaacctggcaggggaaggtttcgacattgtgaagatgcagcga
aaaggttcttatgtgatcaacatggaaaattgggagcgggagggagacacttgcgagtta
gctgtcaatttctatttgggtggaataaaacagaagcttccagcagccatggcaaactgg
cgagccctcaccgactgcaagcgggaggtctcaagcagcatctatgaatccagtgagtcc
ctcatcaataccacaacttcagccgtgaccaacaactggaaacttggcctggaccttgag
attcctgaagtaaagttcaagacaatcattggagggacagattccagagaagcaacatat
gccattgcaaagtcgaagcaggacagatacagtttcaccaggcatgaagtccattgtagc
atctacagatatagcctggtcgaagatcctcctcttcacaaacaatttctgaattcggtg
aagaagctccccactgtttatgatctcaagtctaagccggcctatagaaacctgatagac
acatacggcactcatttcacctctcaagtcaacctgggagggaaagtgagtgctgtaact
tccatcaagtcttgtcaggcgactatgaacggagtgacagtcactgcagtgaaggactgt
ctcgatgtcgaggcctccttgtcatatcaattcagcgctagtttggccgccgagcttcac
tactgtaatgaactaaagaagaaacttggcaccaaccgaagtttcagcagcatgttcagt
gaccgccacttggaaattaaaggaggggtactgaatggaggcgacctgctgttctcaggt
gcgttggacgcaaacgcctacaaagagtggctggagtccttgaaaacgatccctgacgtg
gtgcactacttccttaagccccttcacttcctgttgaaaagtagacatcctgctcaacct
gggctgaagaaagcagtggaggagtacatccttgaaaacgccctgatcaagaaatgctca
gagtcctgtcagataggtacgaggaccagcaaaagggatcactgtgcctgtgtctgccac
agtgatcagagcatcaagtccaactgttgccctgctgggaaaggcctggccaggctgcaa
gtctatggtttgagagcaaagggactttacggggacatttcaaccgaaacggatggtttt
gttgagatctcatatgataaacaagtcaaactcactgaagtgatcaaagacgacgacaat
cccgtttggccagagagctttgaattcggacccatccatatcaactttgacaccaaactc
actttcaaagtgtatgacacagacagagttgtttggaacaaagacgtcctgggtgaatgt
tcctttgatctgcgtagaggaaatgtgagtgacgtctgtgtgttcaaatatggcacattc
ttcttctcctacacagtgcaatgtgctcccagccttggaggctcacgctgtgaagagtac
atcccctctcctatgagcgcctccctggcaaaagtcttccactccagaaatggcatgctg
gctggggagaattggcgacttgagttgggcaggaatcacaccaatgatgcggttgacaag
gttggcttaaagagatgtcatggtgaataa
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