Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392230
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Entry
139392230 CDS
T10872
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A-like isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocla03021
]
139392230
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
139392230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CREPT
CID
CTK3
Takusan
Motif
Other DBs
NCBI-GeneID:
139392230
NCBI-ProteinID:
XP_070996167
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All DBs
Position
32:complement(15188510..15201542)
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AA seq
313 aa
AA seq
DB search
MSAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSKTIVNVWFNELKKAKVSRKLTFL
YLANDVIQNSKKKGPEFTQDFAPVIVDAFKHVSREGEDPCKKQLGRVLSIWQERAVYENN
LLDQLSHVLLGEKKAKKRPYEEIQLDDQDLASQSSPAEPPQTAELIRALQELENAASGDS
ALRQRISSLPAEVQDTSLLHRITDKEQGERLSRLVEEACMLLADFSGRLAAEIDDRRQLT
RTLTLFLHSQRDGLAQNEQKLEEYKRKLARVTQVRKDLRSHLSNLPDLSVLPSVTGGHLH
LPSSGVELYDPTA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccttttcagaggcagctttggaaaagaaactatcggagcttagcaattcccaa
caaagtgtccagactctgtcactgtggcttatccatcatagaaaacactcgaagaccatc
gtcaacgtttggttcaacgaattgaaaaaagccaaggtatccaggaagctcaccttcctc
tacctcgccaacgacgtcatccagaacagcaagaagaaaggacctgagttcacccaggac
tttgctcctgtcattgttgatgccttcaaacatgtgtccagggaaggagaggacccctgt
aagaaacagctgggccgggttctgtccatctggcaggagagggctgtgtatgagaacaac
ctgctggaccagctctcacacgtcctgttgggagagaagaaggccaagaagaggccgtat
gaggagattcaactggacgaccaggacttggcctcccaaagctcccccgcggagccccca
cagacggcagagttaatccgggccctgcaggagcttgagaatgcagcctctggggactca
gcactgcgacagcgaatctcctccttgcctgctgaggtgcaggacacgtcactgctgcac
aggatcacagataaagagcagggtgagcgcctgtccaggctggtggaggaggcgtgcatg
ctgctggcggacttcagcggccgtttggcggcggagatcgacgaccggcggcagcttacg
cggacgctcaccctgtttctacacagccagagggacggcctggcgcagaacgagcagaaa
ctagaagagtacaagcgcaagctggcgcgggtgacccaggtacggaaggatctgcgttct
catctcagcaacctaccagacctctctgtgctccccagtgtgaccggtggacatttgcac
ctgccctcgtctggcgtcgagctttatgaccccacagcctga
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