Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392248
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Entry
139392248 CDS
T10872
Name
(RefSeq) unconventional myosin-Ig-like
KO
K10356
myosin I
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
139392248
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocla01009
]
139392248
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139392248
03036 Chromosome and associated proteins [BR:
ocla03036
]
139392248
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139392248
04147 Exosome [BR:
ocla04147
]
139392248
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139392248
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Phagocytosis
Others
139392248
Others
Actin-binding proteins
Myosins
139392248
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
139392248
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
139392248
Exosome [BR:
ocla04147
]
Exosomal proteins
Proteins found in most exosomes
139392248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
nSTAND3
Sigma54_activat
Zeta_toxin
AAA_22
Motif
Other DBs
NCBI-GeneID:
139392248
NCBI-ProteinID:
XP_070996197
LinkDB
All DBs
Position
32:complement(20949296..21021931)
Genome browser
AA seq
1161 aa
AA seq
DB search
MLVQCNNVDSTSVCLQLSHTHACTHTHTRMYTHTHTHTHTHTHTHTHTHTHTHTHTHTHT
HTHTHTQTHTNSHTHTTERMTCCSMPTTALSDLTKQHTIPESTTPQKNRLTPHPQHATGP
QQHLSACLHFSLLSLQSSFVPSSLFICLSVRMAELEGLEFGKSDFVLLDEVNMEQFMENL
KLRFEKARIYTFIGEVVVSVNPYKQMDIYGKEAIDAYRGRELYENPPHLYAVADAAYKAM
KRRAKDTCIVISGESGAGKTEASKYIMQYIAAITNPSQRAEVESVKNVLLKSNCVLEAFG
NAKTNRNDNSSRFGKYMDINFNFNGDPTGGHINNYLLEKSRVVQQQGGERNFHSFYQLLR
GGSEEMLGSLHLQNDPVNYVYTREGAASTTSNNDRSNHRAVLSALQVIGFSEEEIDSIYR
ILGTILILGNLQFETDSESVQVVGLEAVSHIAGLTTTKPDNVTKSLLFRTVATGGGEVIE
KGHTEKEACFGRDAFAKALYERLFCWIVARINAVIEVKDYNPVLHGKNTVIGVLDIYGFE
IFENNSFEQFCINYCNEKLQQLFIELILRQEQDEYQREGITWQHIDYFNNQIIVDLVEQP
HKGIISVLDEACLTVGKVTDTICLESMDAKLGQHPHYTSRKLTPSDKTMEFHRDFRIRHY
AGDVTYSVEGFLDKNKDPLFQDFKRLMYNSSNPVLKEMWPDGQLSITEVTKRPLTAATLF
KNSIVALVDKLGCKEPYYVRCIKPNEMKSPVLFDDARCQHQVAYLGLLENVRVRRAGFAY
RQPYARFLQRYKMTCEYTWPNHLMETDREAVEAIVTQHGFQDDVAYGHTKLFVRTPRSLF
TLEQERAALIPILVLFLQKVWRGALARMRCQRMRAIYAIMGCYKRYKVKAHFWEVERRFT
NVRNMADYGKSVEWPTPPAALAQFDSITQQLHRRWRARQIVKNIPPSDMGEVRAKVAALG
ALSGERKDWGCGRPWERDYLSNVRDCPQTSSNFIRISKELRNKDQYNQVLFSGFCRKVNR
FNKSTDRALFITEKHIYKLDPKKQFKVLKRLPLESMTGLSITAGVDQMVALHTSSQDDVL
LYIQRGELCPNQDRIGELLGTLIDHFTRVRNAPLPVKVCCSAVQLYMRGKPKSVTLETKA
GQAHADFRKNRDGFTLLIPSN
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgttggttcaatgtaataatgttgattcaaccagtgtgtgccttcagctctctcacaca
cacgcatgtacacacacacacacacgcatgtacacacacacacacacacacacacacaca
cacacacacacacacacacacacacacacacacacacacacacacacacacacacacaca
cacacacacacacacacacagacacacacaaactcacatacacacaccactgagaggatg
acgtgctgcagcatgccgaccacagccctcagtgacttgactaagcagcacaccatccca
gaatccaccacaccacaaaagaacagacttacgccacacccacagcacgctaccgggccc
cagcagcacttgtctgcctgccttcacttctctctcttgtctcttcagtcctcgttcgtt
ccttcctctctgtttatctgtctgtccgtcaggatggcggagctggagggtctggagttt
gggaagtcagattttgtccttctggatgaggtgaacatggagcagtttatggagaatctg
aagttaaggtttgagaaagcccgtatctacaccttcataggtgaagtggtggtgtcagtc
aatccctacaaacagatggacatctacgggaaagaggctatcgacgcgtaccgcggccgg
gagctgtacgagaacccaccccacctgtatgctgtggccgacgctgcgtacaaggccatg
aagagacgggccaaagacacctgcatcgtcatatcaggtgagagtggagcaggaaagaca
gaggctagcaagtacatcatgcagtacatcgcagctattaccaaccccagccagagagca
gaggtcgagagtgtgaagaacgttctgctgaagtcaaactgtgtgctggaggccttcggt
aacgccaagaccaaccgcaatgacaactccagccgcttcggcaagtacatggacatcaac
ttcaacttcaacggggaccccaccggcggccatattaacaactacctgctggagaagtca
agggttgttcagcagcagggaggagagaggaactttcactccttctatcagttactgcgt
ggaggttcagaggaaatgctggggtcacttcacctccagaatgaccctgtcaactatgtg
tacaccagagaaggagctgcctccactacatccaacaatgaccggtccaatcacagggct
gtgctgagtgccttacaggtgattggcttctcagaggaggagatcgactccatctacagg
atcctggggaccatcctcatcctgggcaacctgcagtttgagacagacagtgagagtgtc
caggtggtgggtttggaggctgtgagtcacatcgctgggctgaccaccacaaagccagac
aacgtgactaagagcctgctgttccgcactgtggccaccgggggcggagaggtcatagag
aagggacacactgaaaaggaggcctgctttggccgtgacgcttttgccaaggctctctat
gagagattgttttgttggattgtggctcgtatcaatgctgttattgaggtgaaagactac
aacccagtgctccatgggaaaaacacagtcatcggagtgctggatatttacggctttgaa
atcttcgaaaacaacagctttgaacagttctgtattaactactgtaatgagaagctgcag
cagctcttcatcgagctgatccttcgccaggaacaagacgagtaccagagagagggtatc
acctggcagcatattgactactttaacaaccagatcatcgtggacctggtggaacagccc
cataagggcatcatctctgtgttggacgaggcctgtctcactgtgggcaaggtgacagac
accatctgcctggagagcatggatgctaagctgggacaacaccctcactacacctcccgc
aagctcaccccatcagacaagaccatggagttccacagagacttccgtatccgccactat
gctggggatgtcacatattccgtcgagggctttttggacaagaacaaggacccactcttc
caagatttcaagcggctcatgtataacagttccaaccctgtgctgaaggagatgtggcca
gatggtcagctgagcatcacagaggtcactaaacgacccctgactgcagccaccctcttc
aagaactccattgtggcccttgtggataaactgggctgcaaggagccatactatgtgcgc
tgcatcaagcccaatgagatgaagtctcccgtgctgtttgacgacgcccgatgccaacac
caggtggcgtacctgggcctgctggagaacgtcagggtgcggagggcagggttcgcctac
cgccagccctacgcacgcttcctacagaggtataagatgacgtgtgagtacacctggccc
aatcacctgatggagacagacagagaggcagtggaggctatcgttacgcagcacggtttc
caggacgacgtggcgtatggacacaccaagctgtttgtgcgaacacctcggtcccttttc
acgctggagcaggagagagctgcgctcatccccatcctggtgctgttcctacagaaggta
tggcgcggggcactggcgaggatgaggtgccagcgaatgcgtgccatctatgccatcatg
ggctgctacaagcgctacaaggtcaaggcccacttctgggaggtagaacgacgtttcacc
aacgtacgcaacatggctgactatgggaagagtgtggagtggcccacgccgccggcagca
ctcgcacagttcgacagcatcactcaacagctccatcgcaggtggcgtgccaggcagata
gtgaagaacatccctccgtctgacatgggggaggtgagggccaaggtggctgctctgggg
gctctgagtggggagaggaaggactggggctgtggccgaccctgggagagggactacctg
tctaacgtgagggactgccctcagaccagctctaacttcatacggatctccaaagagctg
agaaacaaagaccaatacaaccaggtcctcttctcagggttctgtaggaaggtgaatcgg
ttcaataaaagcacagaccgagccttgtttattacggaaaaacacatctacaaactggac
cccaaaaaacagttcaaggtgttgaaaagactgcctctagagagtatgacaggcctgagc
atcactgcaggcgttgaccagatggtggcgctacacacctcctcccaggatgatgtcctt
ctctacatccagagaggagagctgtgccccaaccaggaccgcatcggggagctgctggga
acgctcattgaccacttcacacgagtgaggaacgccccgctaccagtgaaggtttgctgc
tcggccgtccagctgtacatgcggggcaagcccaagagtgtaaccctggagaccaaggcc
ggccaggcccacgcagacttccgtaagaaccgcgacggtttcaccctcctgatcccctcc
aactga
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integrated database retrieval system
