Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392288
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Entry
139392288 CDS
T10872
Name
(RefSeq) epsilon-sarcoglycan-like isoform X1
KO
K27061
epsilon-sarcoglycan
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139392288
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Motif
Pfam:
Sarcoglycan_2
Sarcoglycan_2_C
TehB
Motif
Other DBs
NCBI-GeneID:
139392288
NCBI-ProteinID:
XP_070996262
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Position
32:15813137..15844565
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AA seq
471 aa
AA seq
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MDTKVVPVWIYMVVTILSTLHADRNVYPSAGVLFVHVLEREHFKGEFPPYPKPGDSSNDP
ITFNTNLMGYPDRPGWLRYIQRTSHSDGVLYGSPTAEHVGKATIIEIIAYNRRTFETARH
NLVINIMSTEEYPLPYQAEFYIKNMNVEEMLASEVLGDFLGAVKNVWQPERLNAVNITSA
LDRGGRVPLPINNLKEGVYVMVGADVQFSSCLREVENSQNQLRCSQEMEPVISCDKKFRA
QFDIDWCKINLVDITKMIMIHSNRPDPGTGVLPDIGGYNPPPESLKSRDFFADFLITLAV
PSAVAMVLFSVLGYSMCCRREGVDKRNMQTPDIQLVHHSSIQKSTKELRSMSKNREISWP
LSTLPVFSQSGEVVPPIHPDNYETTSMPLMQTQTNLQNQIQIPQQQPSDEETEMLLCLMS
DHVCVTVHFLSHNSKNTFYLNVLFAVNCRTRPVAGQEDPLSLHLSPACCMN
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggacacaaaggttgttcctgtatggatttatatggtggtcaccatcctgtcgacgttg
cacgccgaccggaacgtctacccgtctgcaggtgtgctgtttgtccacgtcctggagaga
gagcacttcaaaggagagtttcccccctatcccaaacctggggattccagcaacgacccc
atcactttcaacaccaacctgatgggctacccagaccggccaggctggctgcgttacatc
cagagaacctcccacagcgatggggtgctctacggatcccccactgccgaacacgtgggc
aaggccaccatcatagagattattgcctataacagacgcactttcgaaacggcccggcac
aacttggtcataaacatcatgtccacagaagagtacccactgccgtaccaggcagagttc
tacataaagaacatgaatgtggaggagatgttggcaagcgaggttctgggagacttccta
ggagcagtgaagaacgtgtggcagcccgaacgcctcaacgccgtcaacatcacctcagcc
ctggacaggggcggacgtgttcccctgcccataaacaacctcaaagagggtgtgtatgtg
atggtgggagctgacgtgcagttctcttcctgcctgagggaggtggagaactcccagaac
cagctccgctgcagccaggagatggagcctgtcatcagctgtgacaagaagttcagagcc
cagttcgacatcgactggtgtaagatcaatctggtggacatcaccaagatgatcatgatc
cacagtaaccgtccggacccagggacgggggtcctgcctgacatcggggggtacaacccc
ccgccagagtctctgaagagcagggacttctttgccgacttcctcatcacgttggcggtg
ccctcggctgtggccatggtcctcttcagcgtcctgggttactccatgtgctgccggcgg
gaaggggtggataaaagaaacatgcaaacaccagatatccagttagtgcatcacagctcc
atccagaagtcgaccaaggagctgcggagcatgtctaagaacagggagatctcctggccc
ctctccaccctgcctgtcttcagccaaagtggggaggtggtgccccccatacacccagac
aactacgagacaacaagcatgccactgatgcagacacagacaaacctgcagaaccagatt
cagataccacagcaacagccatcagatgaagagacagagatgcttttatgtttaatgtct
gaccatgtatgtgtaactgttcattttctgtcacataacagtaaaaatacattttattta
aatgtgctgtttgctgtcaattgtagaaccaggcctgtggcaggccaggaggacccactc
tctcttcatctttctccagcctgttgtatgaattag
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