Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392316
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Entry
139392316 CDS
T10872
Name
(RefSeq) neurochondrin
KO
K27819
neurochondrin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
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Gene cluster
GFIT
Motif
Pfam:
Neurochondrin
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
139392316
NCBI-ProteinID:
XP_070996318
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Position
32:34531370..34540278
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AA seq
828 aa
AA seq
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MMALAMAEGTFIVSSESDSSGEHTGSEEGEGAPLAIDGLSAAQREVLERCLHTLTHAKND
SHTLAALLLITRLCPAGQLDSATLRRIFEAVGLSLPARLLVTAVRGSDASGLPPEELLSL
GTALLAALSTDPDMAAHPQLLTTIPLLLGLLADGPKWSPQKQAQHQARQGMEPDQPSQAE
DEQSSQSTNTTKEPVQDTAGFKAPSQDATSPTDSEEGTAENGAPTSHSTVKLDEALATDC
YQVLITVCALPRGPDQLLARGAVPALCRALGQKQTLSHEKGLPLLGALLSGKTKERAWSK
HPAELLSLLARVSQDFCQATGLTQLDMCALVPQFLPSPGGTPKDTDLMPTMVSLWVALRP
MLQAKLTPGQIGPVLVLSACLLDLCGWEPVGPPKFCCLLVNRACVEVRMGLEEPPDTELS
PQLQQTLTACYRVMEAAMEQACSSQGVAQQSDAQPQTAITGLSLQQSRQVLLVLEEAFSA
VIYHLQQVDPSRYGDPFIFATFRSLCAWLAEETSCLKEEVTALLPFLMGYARSHLQGESQ
DQGLSNWMSEMSVGDCSQGGAWTGKDAVRYLLPALCHLSAEDAPRKVLLTLDTPGLLVAF
LTQGWGDLRGKGGAALARDPSMETACSALLNFTVTEPERVRKDPCFRSLESLLSEALPVL
LHKPRLLVLAANLCTLGLMIGRLKPAPKAPVEASQRRFFSAALRFLRDALDSRSGPGPVR
VSPAWEEWWEEAGELWRLGLQALGGCVKAQPWIITLVREEGWLNHTLAMLGSCSTLPDPH
TQGALEEALCAVALQCPFCRQEISVLLKSSAKGALGSMDSLRKSLTTN
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgatggcattagcaatggctgagggtacatttattgtgagctctgagagtgattccagt
ggcgaacacacaggcagtgaggaaggagagggagcgccactggcgatagatggcttgtct
gctgcccagcgtgaggttctggagcgctgtctacacacactcacccatgccaaaaacgac
agccacacactcgctgcacttctcctgattacacgattgtgtccagcaggccagcttgac
agtgcgacactgcggcgcatctttgaggcggtggggctgagtcttccagctcgcctgctg
gtgactgcggtccgggggagtgatgcctccggcttgcccccagaggagcttctgtctctg
ggcacagctctgctggctgccctcagcacagacccagacatggccgcccacccacagctc
cttaccaccatccctctactgctagggctgctggcggatgggcccaaatggagcccgcag
aaacaagcccagcaccaggctagacaagggatggaaccagaccagccaagccaggctgaa
gatgaacagtcatcacagagcacgaacactaccaaagagcctgtccaggacactgcagga
ttcaaagcaccgtctcaagatgcgacgagccctacagactctgaggaaggtactgcagaa
aatggagctccaacttcccattcaacagtcaaactggatgaggccttggctacagactgt
taccaggttttgattacagtgtgtgctttaccccggggcccagaccagctcctggccagg
ggcgccgtcccagctctttgtcgggccttgggacagaaacagacactgagccatgaaaaa
ggactaccccttcttggtgccctgctctcaggcaaaactaaagagagagcctggagtaag
cacccagccgaactcctctctctcctggccagagtctcccaagacttctgccaagccact
ggcctcacccagctcgatatgtgtgccctggtgccgcagttcctcccctcgccaggtgga
acaccaaaggacactgacctaatgccaactatggtcagtctgtgggtggccctgaggccc
atgctgcaggctaagctgaccccaggtcaaataggccctgtgttagtcctctccgcctgc
ctgttggacctgtgcggctgggagcctgtggggccacctaagttctgttgcctgctggta
aaccgggcctgtgtggaggtgaggatgggcctggaggagccccccgatacagagctgagt
ccccaactgcaacagacactcaccgcctgctaccgcgtcatggaagcggccatggagcag
gcctgcagcagccagggagtcgcccagcagagcgatgcccagccacagactgccatcact
ggactcagtctgcagcagagccggcaggttctcctggttctggaggaggccttctcggca
gtcatctatcacctgcagcaggttgatccgagtcgttacggcgaccccttcattttcgcc
acgttccgctccctctgcgcctggctcgccgaagagacttcatgtctcaaggaggaagtg
actgccctcttgccctttctgatgggctacgccagaagccatctgcagggagagagtcag
gaccagggtctttccaattggatgtcggagatgtctgtaggcgactgctcacagggaggg
gcttggacaggcaaagatgctgtaaggtatctcctcccagctctgtgccacctctctgca
gaggacgccccaagaaaggtgttgctcaccctggacaccccaggtctcctggtggccttc
ctaacccagggatggggtgacctgcgggggaaaggaggggcagcgttagctcgggacccc
agtatggagacagcctgctcggccctgctcaacttcactgtcacggagccggagcgagtc
agaaaggacccttgtttcagaagccttgagtcactgttgagtgaagcacttcctgttctc
ctgcacaaaccccgcctcttggtcctggctgccaatctttgtactctggggctcatgatt
ggcaggcttaaaccagctcctaaagctccggttgaagcaagtcagaggcggttcttctcc
gcagccctgcggttcctccgtgatgccctggactccaggtcgggcccgggcccagttagg
gtgagccctgcctgggaggagtggtgggaggaggctggggagctgtggaggctgggtctg
caggccctgggaggttgtgtgaaggcccagccctggatcatcaccctggtcagggaggag
ggttggctcaaccacaccctcgccatgctgggctcctgtagcaccctgcctgacccccac
acccagggggcactagaggaggccctctgcgcagtggcactccagtgcccgttctgtcga
caggagatcagtgtcctcctgaagagcagtgccaagggagccttgggtagcatggacagt
ctgaggaaatcccttaccacaaactga
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