Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392344
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Entry
139392344 CDS
T10872
Name
(RefSeq) neuronal pentraxin-1-like
KO
K25709
neuronal pentraxin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
139392344
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GFIT
Motif
Pfam:
Pentaxin
Laminin_G_3
HlyD_2
Motif
Other DBs
NCBI-GeneID:
139392344
NCBI-ProteinID:
XP_070996363
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Position
32:complement(33318116..33339642)
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AA seq
703 aa
AA seq
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MPDNAIPPLMLLPKVKMRWSGVLPVFILPSLPLFYLLLYTLISSSMAVVSLPGLDYDYGA
QPKFVCTPIPADADPSCFTPGGAAHGPAHDRPSSNGHHGPAAGAPNGNGRRSMGMGIGIS
DEAKSTILHLRESLVRQKETILDQRETIRELTAKLTLCEGFGRGVGHHDDHHDNHHGPPR
LNTHHPSSHHAYHDADHHGDPHYPLNNGHRSDPHHRGKDNAGSKHGAFSPEKTRKTLQTL
KERLENLQARNSSSSYSSSLRDLLQRKIKALEKQLSNHYGGHHDYGHHDDHHDDHHDDHH
DDHHDDHHDDHHDDHHDDQHGPDPHHDDRHDDHHDDHHGPSHHDDHHDDHHETRTPTPTR
HNNRHNNRQNSRHDRHYDRHYDRSHGRHDTHHNDHNGEHHDDHHNDRHGEHHDDHHDLHH
DDHHDDLHDDHHDDHHGNGHSDDGHHGNDDLGHHPRPSYNSKPPAPRPLGRGHNKLETVL
SHLNHRNTDPGTRKKPKSPDAFQIGFPMRTNYIYGKIKRTLLNEIFALTVCLWIKGGSGP
GLGTPFSYSVPGQANELVLIEWGNNPMELLVNDKAVTLPMAMTDGKWQHLCVTWSTHDGH
WEAFQDGVKRGSGENLSAWHPIKPGGVFILGQEQDALGGRFDATQSFVGEMSDLQLWSRV
LTPNEIYSQASCGGHMAGDLITWTEAVVELHGGVTKYPFDPCH
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacaacgccattccacccctgatgcttttgcctaaagtgaaaatgcgttggagt
ggagtactcccagttttcatcctaccctctttgcctcttttttatctactcctttatact
ctcatatcttcctcgatggctgttgttagtttgccgggattagactatgactatggagcc
cagccaaagtttgtttgtaccccgattccagcggatgcagaccccagctgcttcacacca
ggcggggcagcacacggacctgcccacgacagacccagcagtaatgggcatcatggacct
gctgcaggggcgcccaatggtaacggcaggaggtcgatgggaatggggataggaatatca
gacgaggccaaatccaccatcctgcaccttcgcgagagcctggtgcggcaaaaggagacc
atcttagaccagcgggagacgatcagggaactgactgccaagctgaccctctgtgagggc
tttggccggggggtgggtcatcatgatgaccatcacgacaaccaccatggacccccgcgt
ctcaacacccatcacccgagctcgcaccacgcctaccatgatgctgaccaccacggggat
ccacactacccactgaacaatggacatcgatcggacccacaccaccgagggaaggacaac
gctgggagcaagcatggggccttctcccctgagaaaactaggaaaacgctacagacactc
aaggagaggctggagaacttgcaggccaggaattcctccagctcctattcaagctcactg
agagacctcctgcaacgcaaaatcaaagcacttgagaagcagctcagcaatcactacggt
gggcatcatgattatggtcaccatgacgaccaccacgatgaccaccatgacgaccaccac
gatgaccatcatgacgaccaccacgatgaccatcatgacgaccaccacgatgaccaacat
ggacccgatccccatcatgatgatcgacacgatgaccaccacgatgaccaccatggaccc
agtcaccacgacgatcaccatgatgaccaccacgagacccgcacccccacccccacccgc
cacaacaaccgccacaacaaccgtcaaaacagtcgccatgaccgacactatgaccgccat
tatgatcgcagccatggccgccatgacacccaccataacgaccacaatggcgaacaccat
gatgaccatcacaacgaccgtcatggcgaacaccatgatgaccatcatgaccttcaccac
gatgaccaccatgatgatcttcacgatgaccaccatgatgaccaccatggaaacggtcac
agtgacgatggtcaccatggcaacgacgaccttggccatcatcctcgtccatcctataac
agcaagccgccggctccaagacctcttggccgtggacacaacaagcttgaaactgtgctg
agccaccttaaccacaggaacactgaccctggtacccggaaaaagccaaagagtccggat
gctttccagattggcttccctatgcgcactaactacatatatggaaaaataaagaggacc
ctactcaacgaaatcttcgccctcactgtctgcctctggataaaagggggatcagggcct
ggcctcggcactcccttctcctactctgtaccgggacaggccaacgaactggttctgatc
gaatggggcaacaaccccatggaactactggtcaacgacaaggcagtgacattgcccatg
gcaatgacggatgggaagtggcaacatctgtgcgtgacatggtcgacacacgatgggcat
tgggaggccttccaggacggtgtaaaaaggggatctggagagaatctatctgcatggcat
ccaatcaagcctggtggagtctttattctgggccaggaacaggatgccctaggtggccga
tttgacgccacccagtccttcgtgggcgaaatgtcagacctccagttgtggtcccgcgtt
ctcacgcccaatgaaatctacagccaggcttcctgtggaggtcacatggccggtgacctc
atcacctggacagaggcagtggttgagcttcacggtggggtcaccaaataccccttcgac
ccctgccactaa
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