Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392369
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Entry
139392369 CDS
T10872
Name
(RefSeq) GA-binding protein subunit beta-1-like isoform X1
KO
K09454
GA-binding protein transcription factor, beta
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139392369
03029 Mitochondrial biogenesis [BR:
ocla03029
]
139392369
Transcription factors [BR:
ocla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
139392369
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
139392369
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ank_KRIT1
ANK_LRRK2
TC1
Motif
Other DBs
NCBI-GeneID:
139392369
NCBI-ProteinID:
XP_070996409
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All DBs
Position
32:30608049..30623460
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AA seq
426 aa
AA seq
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MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQHGHYSTAEVLLRA
GVSRDARTKVDRTPLHMAASEGHTVIVDLLVRSGADINAKDMLKMTALHWAAQNGHQRVA
ETLVKHGADVHALSKFDKTPFDIAGDIQNADLMLLLQEGMQNQVNMNAEAGMTGSSAQPQ
FIIQGIPGLQGGVVNLADLLNNAAKANSGRLQGGVVNLADLLNNAAKANSAVESEEAIAA
NSLDPGSIQHMVNEQGQRVITIVTDQHGNLQTGGLGQPFFVTMQHGQQMLAMPANQVTEE
VVDEEPQPPPSRKRKLEASANHMESGDTEQLQRQLQEANRKAQEYRQQLMCKEQEAEQYR
MKLEAMSHSHTNGTSEQEEVVGGEEEVQEEVMLQEGDIIIKTEGLDSAEEQVTLVDSAPS
HTEVIS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggtggatttggggaagcggctacttgaggctgcacggaaaggccaggacgat
gaagtcaggacactcatggccaacggggctcccttcaccacagactggctgggcacatct
ccgttgcacctggccgcccaacacggacactattccaccgccgaggttctgctcagagca
ggtgtcagcagggacgcccgaaccaaagtggacaggacccctctgcatatggccgcttca
gagggccacacagtcatcgtggatctattagtcaggagtggagcagacattaatgccaaa
gacatgctgaagatgactgctctccactgggccgcccagaacggccaccaaagggtagcg
gagacgctcgtcaaacatggcgcagatgttcacgctctcagtaaattcgataagacgccg
ttcgacatcgcaggagacatccagaatgcagaccttatgctcctactacaggaaggaatg
cagaaccaggtgaacatgaacgcagaggctggcatgacggggagctcggcccagcctcag
tttatcatccagggcatcccagggctccaggggggcgtggtcaacctggcggacctcctc
aacaacgctgccaaagccaactctggtaggctccaggggggcgtggtcaacctggccgac
ctcctcaacaacgctgccaaggccaactctgcagttgaatctgaggaagccatagcagcc
aattctttggaccccggcagcatccagcacatggtgaacgagcaaggtcaaagggttatc
accatagtgaccgaccaacacggcaacctgcagactggagggcttggtcagccattcttt
gtcaccatgcagcacggacaacagatgttggcgatgccagccaatcaggtgacagaggag
gtggttgatgaggaaccccagcccccgccctcccgcaagaggaaactggaggcctcggcc
aaccacatggagtctggagacacggagcagttacagaggcagctgcaggaggccaaccgg
aaggcccaggagtaccggcagcagctgatgtgcaaggagcaggaagcagagcagtaccgc
atgaagctggaggcaatgtcgcacagccataccaacggcacctcggagcaggaagaggtg
gttgggggtgaggaggaggtgcaggaggaggtgatgctccaggagggagacatcatcatc
aagacggaggggctggactcggccgaggagcaggtgacgctggtggactcggcgccctcc
cacaccgaggtcatctcataa
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