Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392402
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Entry
139392402 CDS
T10872
Name
(RefSeq) protein argonaute-2 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
139392402
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
139392402
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
139392402
microRNA pathway
RISC loading complex
139392402
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
ArgoMid
PAZ
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
139392402
NCBI-ProteinID:
XP_070996468
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All DBs
Position
32:complement(15426001..15443565)
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AA seq
883 aa
AA seq
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MYSSGAAGAAEMLEPPHSSGSIGSDPPSPPVPEYVFKPPSRPDFGTMGRTIKLQANFFEM
EIPKLEVYHYDIDIKPEKCPRRVNREIVEHMVQHFKTQIFGDRKPVYDGRKNLYTAMPLP
IGREKVELEVTIPGEGKDRSFKVAIKWVSCVSLQALQEALSGRLPNIPFETIQALDVVMR
HLPSMRYTPVGRSFFTPSEGCSNPLGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKA
QPVIEFMCEVLDFKSIEEQQKPLTDSQRVKFTKEIKGNHSLPGLKVEITHCGQMKRKYRV
CNVTRRPASHQTFPLQQENGQTIECTVAQYFKDKYKLILRYPHLPCLQVGQEQKHTYLPL
EVCNIVAGQRCIKKLTDNQTSTMIRATARSAPDRQEEISKLMRSANFNNDPYVREFGVMV
RDEMTEVNGRVLQAPSILYGGRQNKAIATPIQGVWDMRNKQFHTGIEIKVWAIACFAPQR
QCTELLLKAFTDQLRKISRDAGMPIQGQPCFCKYAQGADSVEPMFKHLKYTYQGLQLVVV
ILPGKTPVYAEVKRVGDTVLGMATQCVQVKNVQKTTPQTLSNLCLKINVKLGGVNNILLP
QGRPLVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQQHRQDIIQ
DLATMVRELLIQFYKSTRFKPTRIIYYRDGISEGQFNQVRLEVLQHELLAIREACIKLEK
DYQPGITFVVVQKRHHTRLFCMDRNERVGKSGNIPAGTTVDTKITHPSEFDFYLCSHAGI
QGTSRPSHYHVLWDDNHFTSDELQVLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYH
LVDKEHDSAEGSHTSGQSNGRDQQALAKAVQIHQDTLRTMYFA
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtattccagtggagcagctggagctgctgagatgcttgaaccacctcactcctcgggg
tcaattggctctgatcccccatctcccccagtgccagagtatgtgttcaaacccccctcg
cggccggactttggcaccatgggcaggacaatcaaactgcaggccaacttctttgagatg
gagatccccaaactggaggtctaccactacgacattgacatcaagccagagaaatgcccc
agaagggtcaaccgtgaaattgtggagcacatggtacagcactttaaaacgcagatcttt
ggggatcgaaagccagtgtatgacgggaggaagaatctctacacagccatgcccttaccc
atagggagggaaaaagtggagctggaagtgaccatcccaggcgaggggaaggacaggagc
ttcaaagtggccataaagtgggtgtcctgcgtcagtttgcaagctcttcaagaagccctg
tcgggacgactgccaaacatccccttcgagaccatccaggccctggatgtggtcatgaga
catttgccctctatgaggtacacccccgtcggacgttctttcttcaccccttcagaggga
tgctctaaccccctgggcgggggcagggaggtctggtttgggttccaccaatcagtcagg
ccttccctgtggaagatgatgctaaacattgacgtgtctgcaaccgcgttctacaaggct
cagcctgtgattgagttcatgtgtgaggttttggatttcaaaagcattgaagaacaacag
aagcccttaaccgactcccagagagtaaagtttaccaaggaaatcaaaggtaatcattca
ttaccaggtctgaaggttgagatcactcactgtggtcagatgaaaaggaagtacagagta
tgtaatgttaccagaagaccggccagccaccagacgtttcctctgcagcaggagaatggc
cagaccatagaatgcacagtagcacagtacttcaaagacaagtacaaactcatactacgc
tacccccacctcccctgtctacaggttggacaggagcagaaacacacctacctccccctt
gaggtatgcaacatagtagctggccagcggtgcatcaagaagctgacagacaatcagacg
tccactatgatccgtgccacagcccgatcagcacccgaccgccaggaagagatcagcaaa
ctgatgagaagtgccaactttaacaatgatccttacgtgcgtgagtttggggtgatggtg
agggatgagatgaccgaggtgaatggccgagtcctccaggccccatctatcctctacgga
gggcggcagaataaagcaatagcaactcccatccagggagtgtgggacatgaggaacaag
cagttccacactggcatagagatcaaggtgtgggccatcgcctgctttgccccacagaga
cagtgtactgaacttttgctcaaggcgtttacagaccagctgcgtaagatttctcgtgac
gcggggatgcccatccagggccaaccctgtttctgtaagtacgcccagggggcggacagc
gtggagcccatgttcaaacatctcaagtacacctatcaaggcttgcaactggtggtggtc
atcctgcctgggaagacgcctgtctatgctgaggtgaagcgtgttggtgacacggtgctg
ggcatggccacccagtgtgtccaggtgaagaacgttcagaagaccactccccagaccctc
tctaatctctgcctgaagatcaacgtcaagctgggcggggtcaacaacatcctcctccca
cagggcaggcccctggtgttccagcagccagttatcttcctgggtgctgacgtcactcac
cctcctgctggagacgggaagaagccttccatcgcggcagtggtggggagcatggacgcc
caccccagccgctactgtgccacagtgcgggtacagcagcatcgccaggacatcatccag
gacctggccacaatggtcagagagctgctcatccagttctacaagtccacccgcttcaag
cccacccggatcatctactaccgcgacggcatatctgagggccagttcaaccaggttaga
cttgaggtgctccaacatgagttactggctatccgtgaggcctgcatcaaactggagaaa
gactaccagcccggtatcaccttcgtggtggtgcagaagagacaccacactcgacttttc
tgcatggacagaaacgagagggttggtaagagtggcaacatccctgccggcaccacagtg
gacaccaaaatcactcacccatcggagtttgacttctatctgtgtagccatgctggcatt
caggggaccagccgaccatcccactaccacgtgctgtgggacgacaaccatttcacctca
gacgagctgcaggtactcacctaccagctgtgccacacctacgtgcgctgcacccgctcc
gtgtccatcccagcgccggcctactacgcccacctggtggcattccgtgcccgctaccac
ctggtggacaaggagcatgacagtgcggagggcagtcacacgtcgggacagagcaacggg
cgtgaccagcaggccttggccaaggcagttcagattcaccaggacacactgcgcacaatg
tacttcgcctga
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