KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392419
Entry
139392419         CDS       T10872                                 
Name
(RefSeq) splicing factor 3A subunit 3-like
  KO
K12827  splicing factor 3A subunit 3
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    139392419
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ocla03041]
    139392419
Spliceosome [BR:ocla03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    139392419
 Complex B
    139392419
 Complex C
   U2 SnRNP specific factors
    139392419
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd
Other DBs
NCBI-GeneID: 139392419
NCBI-ProteinID: XP_070996495
LinkDB
Position
32:24018287..24029872
AA seq 501 aa
METILEQQRRYHEEKERLLDAKTKEMMHKKTTLREQINSDHRTRAMLDRYMDVSSTVREA
YEDKDGMRKDELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSMEFDELVKARENP
TEETQNMVEFSDEEAYGRYLDLHDCYRKFVNLKGAEKLEYISYLSSFDQLFDISKDRKNA
EYKKYLEMLLEYLQDYTERVKPLLDQNDLYGKILGEFEKKWEMGTFPGWPKETSSALTHA
GAHLDLSAFSSWEELASLGLDRLKSALMALGLKCGGTLEERAQRLFSTKGKSLESLDPSL
FAKNPKSKGPKKDTERNKEIAFLESQIYEYVEILGEQRQLTHENVQRKQARTGEEREDEE
EEQLSESESEDEDNEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCEICGNYTYRGPK
AFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWSKLKSQKSSERWQPDTEEEYE
DSSGNVVNKKTYEDLKRQGLL
NT seq 1506 nt   +upstreamnt  +downstreamnt
atggagacgattttagaacaacaacgtcgctaccatgaggagaaggaaaggctgttggat
gccaaaacaaaggaaatgatgcataagaaaaccacgttacgcgaacaaataaactcagac
catcgaacaagagcaatgttggatagatacatggacgtgagttcaactgtcagggaagca
tatgaagacaaagatggtatgaggaaggatgaactgaatgccatatcaggaccaaatgag
tttgcagagttctacaacagacttaaacagatcaaggagttccacaggaagcatcctaat
gagatatgtgtgcccatgtccatggagtttgacgagctggtcaaggctagagagaaccca
actgaagaaacacagaacatggtggaattcagtgatgaggaggcctatggacgctacctg
gatctccatgactgctatcggaagtttgtcaacctaaaaggggccgagaaactggagtac
atcagctacctgtcctcatttgaccagctgtttgatatctccaaagacagaaagaacgct
gaatacaaaaagtacttagagatgctactggagtaccttcaggactatacagagagagtc
aaacctctgcttgaccagaatgatctctacggcaagatcctgggagagtttgagaagaag
tgggagatggggaccttccctggctggccaaaagagacgagcagtgctctgacccatgca
ggagcccacctggacctttctgctttctcctcttgggaggagttggcttcccttggtctg
gacaggttgaagtctgcccttatggccctgggcctgaaatgtggaggaaccctggaggag
agagcccagaggctgtttagcaccaaaggcaaatctctggaatctctggatccctcccta
ttcgccaagaaccccaagtccaaaggacccaagaaagacacggagcgtaacaaagaaatc
gccttcctggagtctcagatttatgagtatgtggaaatcctgggggagcagaggcagctg
actcatgagaacgtgcagaggaagcaggcccggacaggagaggagagagaggatgaagaa
gaggagcagctcagtgagagtgagagtgaagatgaggacaacgagatcatctacaacccc
aagaacctacctctcggctgggatggaaagcccattccatactggctgtataaactccat
gggctgaacatcaactataactgtgagatctgtggaaactacacatacaggggacccaag
gccttccagaggcactttgcagagtggcgtcacgcccatggcatgcgctgcctgggaatc
cccaacactgctcactttgccaacgtcacccagatcgaggacgctgtctctctgtggtca
aagctgaagtcccagaagtcatcagagcgttggcaaccggatacagaggaggagtatgag
gactccagtggaaacgtggtcaacaagaagacctacgaggatctgaagagacagggtctg
ctgtag

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