Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392507
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Entry
139392507 CDS
T10872
Name
(RefSeq) semaphorin-3C-like
KO
K06840
semaphorin 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
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Gene cluster
GFIT
Motif
Pfam:
Sema
Ig_3
PSI
I-set
V-set
ig
Ig_2
Motif
Other DBs
NCBI-GeneID:
139392507
NCBI-ProteinID:
XP_070996619
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Position
33:complement(20557023..20602464)
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AA seq
769 aa
AA seq
DB search
MRWPEGVIKTPSWMGIRSTLLALSLLLTCVSSFLQPLPRVFLSFEDLQASQTVEYYSLSD
KAMDYRILLMDEDQDRMYVGCKDHVLSMDINNITHGTLKVFWPASVSKIEECQMAGKDPT
HGCGNFIRVVQPFNRTHLFICGSGAYSPVCAFINRGRRPEEQVFHIDSRAESGKGRCSFS
PRVNTVSVMLNQELFSGMYIDFMGTDAAIFRSLTRRNAVRTDQHNSKWLSEPIFIDAQLI
PDGSDPNDAKLYFFLRERLTDNSGNTKNIHTMVARVCPNDIGGQRSLVNKWTTFLKARMV
CSVLEEDGTETHFDELESVFSLETDHPKSLLVFGVFTSTSSVFKGSAVCVYNMADILTVF
NGPFAHRDGPNFQWVAYQGRIPYPRPGTCPGGAFTPHIQSTKEFPDDVVTFVRNHPVMFN
SIYPVGRRPLVVRTQADYKYTSIAVDQVTAADGHYQVLFLGTDKGTVQKVIALPTNRSLD
QDLILEELEVFKNQAPVTNLRISSKKQQLYVSSEHGVSQVSLHRCHAYGSACADCCLARD
PYCAWDGLSCSRFYPTGKRRSRRQDIIHGNPLTQCRGFNLKAYRNAVEMTQYGVKNNTTF
LECLPKSPQASVRWLIHRDNDRRKEVKLGDRVVATDHGLLIRSVQLSDQGLYYCLATENT
FKRTVAKLRLRVLSEAMVSVLTDKQQSPWAWASTLHPKALLSAFSPAESLAVQQYCKERK
QLQSLQGARQQKGPRGGPPLRGDMAKLKPLLDLRKSRNRRNHLELPDDV
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgaggtggccggagggggtcattaagaccccgtcctggatgggaatcagatccaccctc
ctggctctctctctcctcctcacttgtgtctccagcttcctccagccactgccaagagtc
ttcctctccttcgaagacctgcaggcctcccagacggtggagtactacagtctgtcagac
aaggccatggactacaggatcctgttgatggatgaggaccaggacaggatgtatgtaggc
tgtaaggaccatgtcctgtctatggacatcaacaacatcacccatgggacactcaaggtg
ttttggcctgcatctgttagcaagattgaggaatgccaaatggctggcaaggaccccacg
catggatgtgggaacttcatccgggtggtccagccgttcaacagaacccatctgttcatc
tgtgggagtggtgcctacagtcctgtctgtgccttcatcaacaggggcaggagaccagaa
gagcaagtgttccacattgactccagggcggaatctgggaagggaaggtgctccttcagt
cctagagtcaacactgtctccgtcatgcttaaccaggagctgttctcaggcatgtacata
gacttcatggggacggacgctgccatcttcaggagcctcaccaggaggaacgcagtgagg
acagaccagcacaactccaagtggctgagtgaacccatcttcatagatgcccagttaatc
ccagacggatcggatcccaacgatgctaaactgtatttcttcctccgagagagactgacg
gacaacagtgggaataccaagaacatccacaccatggtcgctagagtgtgtcctaatgac
ataggtggccagcgtagcctggtgaacaagtggaccacgttcctgaaggcccggatggtg
tgttcagttctggaggaggacggcaccgagacacactttgacgagctcgagagtgtgttt
tctctggaaaccgatcaccccaagagcctcctggtgttcggcgtcttcacatccacaagc
tcagtgtttaagggctcggccgtgtgtgtctacaacatggcagacatcttgacagtcttc
aacgggccgttcgctcacagggatgggccgaactttcagtgggtggcgtaccagggacgg
atcccctacccccggcctggaacatgtccaggcggagccttcacccctcacattcagagc
accaaggagttccctgacgacgtggtgacgtttgtcaggaaccacccggtcatgttcaat
tctatctaccccgtgggcaggaggcccctggtggtcagaacgcaagctgactacaagtac
acctccatcgctgtggaccaggtgaccgccgcagacgggcactaccaggtcctcttcctg
ggcacagacaaagggacagtgcaaaaggtcatcgctctccccacaaaccgctccctggac
caggatctgatactagaagagctggaagtgtttaagaaccaagctccagtgacaaacttg
agaatatcttccaaaaaacaacagctgtacgtaagttcagagcacggcgtgtcccaagtg
tctctgcaccgttgccatgcctacggctcagcctgcgccgactgctgcctggccagagac
ccctactgtgcctgggacggcctgagctgctcccgcttctaccccactggcaagagaagg
agcagaagacaggacatcatccatggcaacccactgactcagtgcagaggattcaacctg
aaagcgtacaggaacgcggtggagatgacccagtatggagtgaagaacaacaccaccttc
ctagagtgtcttcctaagtcccctcaggcctccgtccgctggctcatccacagagacaat
gacaggaggaaagaggtgaagctgggtgaccgtgtggttgccactgaccacggcctgctc
atccgctccgtccagctgtcagaccagggcctgtactattgcctggccacggagaacacc
ttcaagcgcaccgtggccaagctccgcctgcgtgtcctgagtgaggccatggtgtcagtg
ctgacggacaagcagcagtctccctgggcctgggccagcaccctgcaccccaaggccctg
ctctcagccttcagccctgcagagagcctggccgtacagcagtactgtaaggagaggaag
cagctccagagcttgcaaggggccaggcagcagaaggggccgaggggagggcctcctctc
cggggagacatggccaagctcaagcccctgttagacctcaggaagagccgcaaccgcaga
aaccacctggaactgcctgatgatgtctga
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