Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392516
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Entry
139392516 CDS
T10872
Name
(RefSeq) non-muscle caldesmon-like isoform X1
KO
K12327
caldesmon
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
139392516
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139392516
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
139392516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
139392516
NCBI-ProteinID:
XP_070996641
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Position
33:complement(10563159..10618889)
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AA seq
591 aa
AA seq
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MDDDFERRRELRRQKREEMRLEAERMAFQGSNEDEEEAARERRRRARQERMRGMGGEEPS
DSVVMTNSHSVTETVSESSSSVTSSGGGDDDEQALLERMAKREERRQKRMMDALEREKDQ
NPGSAGNHGSGENSVDERSVGRRGRYRDNEEEVEERNCRKEEEGKAAPEEEEAEQGEEEE
EEVVDEKPRRSYMREQESIDENTRDEEDTGEQAVVLNEVKESVDSEAEVEEDAELSDKVE
EPDQLEVEGTTVTPNNETEEDCDISTIQNGLDVVNEKQNGGLHEETPPKHKKTERTLSRG
SVRSPEAGAEEEQDDAANLEAERKLEELKRRRGDAESEEFERMRRKQQEAEQELEALKKK
REERRKIIEEEERQKKQEEAEKKDREEEEKRRMKEEIERRRAEAAEKRQQMGVETVDGEA
KPFKCFSPRGSSLKIGERAEFLNKSAQKSTVKTSHSPVVSKIDNRLEQYTSVAQNKDMRS
PRSGAVDLPMVTDGIRNIKTMWEKGNVFNSPGGGGGTYKEAAGMKIGVAGRINDWLNKTP
ESKTPGGRPADLKPGDVTNKRSLWENKGSSPAKVTGRGENKSVANAGMGHE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgactttgagcggcgcagagagctcaggaggcagaagagggaggagatgcgc
ctggaggctgaacggatggccttccagggtagtaatgaggatgaggaggaggctgcaagg
gagcgtagacgccgggcacgtcaggagaggatgagagggatgggaggcgaggagcccagt
gacagcgtggtgatgaccaacagccacagtgtgaccgagactgtgtcggagtcctcctcc
tctgtgacctcctcgggtggaggagacgatgatgagcaggccctgctggagcgcatggcc
aaacgagaggagcgcaggcagaaaaggatgatggacgctctggagcgagagaaggatcag
aaccccggcagtgccggtaaccacggcagcggggagaatagtgtggatgagaggtccgtc
ggccgcaggggccgttaccgagacaacgaagaagaggtggaagagcggaactgccgaaag
gaggaggaggggaaggctgctccggaggaggaagaggctgagcagggagaggaagaggag
gaagaggtggtggatgagaaaccgagacgatcctatatgagagaacaggaatccattgac
gagaacactagagacgaggaagatacaggagaacaagcggtggttttaaatgaggttaag
gaatcagtcgactcagaggcagaggttgaagaagatgctgaattaagtgataaggtagag
gaaccagatcagttagaggtagagggcacgacagtgacaccgaacaatgagactgaggaa
gactgtgacatatcaacaatccaaaacggcttggatgtggtgaatgaaaagcagaatgga
ggtctgcacgaggagactcctccaaaacacaaaaaaacagaaaggaccctgagccgcggc
agcgtgcgctccccggaggcgggggcggaggaggagcaggacgacgcggcgaacctggag
gcggagcgcaagctggaggagctgaaacggcgccgtggcgatgcggagagcgaggagttc
gaaaggatgagacggaagcagcaggaggctgagcaggagctggaggcgctgaagaagaag
agggaggagaggaggaagatcatagaagaggaggagagacagaagaaacaggaggaggcc
gagaagaaggacagagaggaggaggagaagaggaggatgaaggaggagatagagaggagg
agggcggaggcggccgagaagagacagcagatgggggtggagactgtcgacggagaggcc
aaacccttcaaatgcttcagccccagaggatcctccctcaagattggtgaaagggcagag
tttctgaacaagtcggcacagaaaagcacggtgaagacgtctcactctcctgtcgtctct
aagattgacaacagactggagcagtacacctctgttgcgcagaacaaggatatgcggtcc
ccacgctccggtgctgtggacctgccaatggtgacagatgggatacgtaacatcaagacc
atgtgggagaaaggcaacgtgtttaactcgcccgggggcggcggaggcacgtacaaggaa
gcagctgggatgaagataggtgtggcgggccgcatcaacgactggctgaataaaaccccc
gagagcaaaacgccgggaggaaggcccgcggatctgaagccaggggatgtgactaacaag
agaagtctgtgggaaaacaagggatcctccccagccaaggtgactggtagaggggagaat
aaatctgttgccaatgcaggtatgggacacgaatga
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