Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392549
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Entry
139392549 CDS
T10872
Name
(RefSeq) DNA repair nuclease APEX1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03410
Base excision repair
Brite
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
139392549
DNA repair and recombination proteins [BR:
ocla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
139392549
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139392549
NCBI-ProteinID:
XP_070996698
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Position
33:28440877..28443858
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AA seq
312 aa
AA seq
DB search
MSKRAKKNEQEAGDGDHDNGTAPAAKKGKKVKEPEAPILYSDPPDKMNSKDGRAANMKIT
SWNVDGLRAWVKKKGLDWVRDEAPDVLCLQETKCAEKSLPDEITSMPEFPHKYWAGSDEK
EGYSGVAMLCKTEPLKVTYGIGKEEHDKEGRVITAEFPTFFLVTAYVPNSGRGLVRLDYR
KTWDVEFKAYLSDLDKRKPLVLCGDLNVAHEEIDLKNSKGNKKNAGFTAEEREGFNQLLA
AGFTDSFRELYPEQANAYTFWTYMMNSRSKNVGWRLDYFVLSSALLPGLCDSKIRNQAMG
SDHCPITLHMVV
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagagcgaagaaaaatgagcaggaggctggagatggtgaccatgacaacggc
acagctcccgctgccaagaaaggaaagaaggtcaaggaaccagaggctcccattctgtac
agtgaccctcctgataagatgaacagcaaagatggtcgtgctgctaatatgaagatcacc
tcctggaatgtggatgggctcagagcttgggtcaagaagaagggccttgattgggtgcgt
gacgaggccccagatgtgctgtgcctgcaggagacgaagtgcgctgagaagtcccttcct
gatgaaatcacctccatgccggagttcccccacaagtactgggctggctctgatgagaag
gaaggctatagcggggtagctatgctgtgcaagactgagcccctcaaagttacctatggc
ataggtaaagaggagcatgataaggagggccgtgttatcactgctgagttccccaccttc
ttcctggtcaccgcctacgtgcccaactctggccgaggcctggtgcgcctggactatcgc
aagacctgggacgtggagttcaaggcctacctgagcgacctggacaagcgcaagcccctg
gtgctgtgtggcgatctgaacgtggcccacgaggagatcgacctgaagaactccaaaggc
aataaaaaaaacgcaggcttcacagcagaggagcgtgagggcttcaatcagctgctggct
gcaggcttcaccgacagcttccgcgagctgtaccccgagcaggccaatgcgtacaccttc
tggacctacatgatgaactctcgctctaagaacgtaggctggcgtctggactactttgtg
ctgtcctctgctctactgccaggcctttgtgatagcaagatccgcaaccaagctatgggc
agtgaccactgccccatcactctgcacatggttgtgtag
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