Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392602
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Entry
139392602 CDS
T10872
Name
(RefSeq) golgin subfamily B member 1-like isoform X1
KO
K20478
golgin subfamily B member 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139392602
Membrane trafficking [BR:
ocla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
139392602
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LEKR1
Motif
Other DBs
NCBI-GeneID:
139392602
NCBI-ProteinID:
XP_070996794
LinkDB
All DBs
Position
33:complement(20017118..20042225)
Genome browser
AA seq
3039 aa
AA seq
DB search
MLSRLSQGFTNVLQELSGDEPPDGAPQDMLVPQLPPGDAPGAPEESGPGVEEEPLERLAH
LEQLTVRLKEVVRDKDSQLASFEKQLKSERETAGARFTKLKLQAKTKMAALNKQITDLKG
QEGAASSPDSSFTSSAPAVEEELQELRKQLSEVSTSAKNLEERLQMSEQALCEKEAIHTE
QVRVLQAVVCEKDVRFQEQIQKHEDELLRVTVQSQNDAELQQALRAAQRHCEEQEEAMRS
RCQVLEMLQGELNNADQQKQILTAQFRQMEQELAEAGRQREEERQQWAGWSSQAEAELAA
LRVNLEASERDRAAQLASLEASERDRAAQLASLEASERDRSTQMEDLTVKLEWATREREE
VTNREVARLEKELAALREEHGEGQRAGEALAELLTGLRSLAGEGAEEDIPVPTDPALCLG
TLEAQLERLRVEQRESEERCAQVTHTMETLQEQLDKRTAEGEEAVARIQQLEQQIGMAAR
ESMAQCVTDPAVEDVTDAEKAQILALEQQLLEKDHELAALRESLVLAEERGSNDAFKVIS
DQILDQRVDTAMALCDSPTVLPDLLEDTQEEDTTLVAEDRSSLSVSADNESSPELIESQS
DSPGESKGASSDEMVTSSDSEVAHSSWTLLEAVNQDEGQQSPPILQGFGQLQMQSWEENS
SEQETSTVQVESSSVIIRETVQVHLKQQGVTLSDSAPGQVFAQALADEMQNRYSELMAEL
QRLREAASESQERTQGLEEEIRSLAAAKDEAESQAQRYEEELQSARSEMDTVAQHSGSEL
ERQSMVMHLLEEQLDSLQTEGSSKDQKIQALQADLDEAQHSLSEQEGQARMLSTQLEEGE
ITSSELEQKLQDMEASLLEFSQARDMAKAVLSERDTEINELQLRITQKEQEMMELSNGLS
AKLLQTGEEMFLMSTEVKKLKKQIFELEKAGENEKATGESHVEDSDELTSLRKDKEDLTT
QVATIKKRLQAALVQRKELMKKVAAFEKEADQRKGQVGKATEEAPASVPALEKDRKQEVM
AIETTLEEFRQDLRSKEEVMEVLEQKISQQDQVLEETLEMTRRLSEGAQQTPEADTSSEI
TGLQSQVASPESDCETLQKKLQEAQDSHKETIRMAKEKDRHHREQLKQQKEEYNGLLERL
EEQVGERDGLLTRLSELKELQAQKEVSTEKEIHAELETNAAVEKIEKPAAGDWVQEDWVK
FSAPENEAQQQQGDKPITSAEEPSQLLSADIEASLQALKEEVQAEKASCTELEGQLQESQ
ASLSLRESELLVLGKELQALREKESQIEHVYEELEALREKCLQAQTYAEAVKAELEAAAK
GAASDSAESTIAVLQTEVEDFKQFLSNKNNEIMELSQQLGEQSSLVQSMQETVYEKDQSI
ASLQEGLRAEKERSQRLEAEVPQKQEEEKGSEAKILQLQQKLKAALISRKEALKENKSQK
EELASTDKVITKLQQRMEAREVELEKLRAERERLIEEVDRTLVENQSLGGSCESLKLAME
GMLTEKDFCKREAESAREEAARACREWEDKVHGMKDEYETLLKSYENVSDEAERVRRVLE
AARQERKELVARARTHEAAKQEAERQKEEAQKEVDTVKDKMRKFAKTKQQKIMDLEEENE
RLREMDEKKGIRREDKALKGELERLKEEFEALKADLNATTAQRDSLEQQGVELREQLAQE
LEKGDRLAPDKTPSSDDVVEETIVAQQPSTVMTKTTQEPVKSQPQDIEPHSQAIESEVAP
PETPSVEEMVKTEITENTQALIDEKLSKMEEALQSERELRQQREAELTAELASLEQRLQE
SKEKEQTQREEPVKTDMSESELATIEGKRREMEAALHSEREPWQESEAELKAGLASLEQL
LQESKVKEQRLMEESSKREAQLQELHSSLEVEKDDLEECLMDQLAQLNGSIAGYQQDAAD
SRERLAELQREVERLERERAELEALAESERDRAARLEEDKRQAQRERAEAEAESGKQREL
EQQLKSAQRVKEGSQSRAKQLEELLREKQLEVRQMQKDCIQYQERISEMAREGKALQLGS
NEVHKELGQAYLERTKVTDALKKAEAELSSCKAQLVETQTEASQAKAERRACEQTALQRE
AELKAEAEQSLDSVRFRLGAELKQIELRLEESYREKEREEDATREAKELADTAERQAQQM
QARLDESLARLAAFSRCMSSLQDDRDRVLDETRQWESRFNSTLQGKEAEVREGETRSRDL
AEKLQKETAQREELQLTVDRLQKADEQWQLKWEQEEKKLRENQAAMEQERGELQKSLAQT
MTSLADTRAQLASLESEAEGLRHRTQALEEAVGKLQGETNEVRSQLKEREAEGRRLGLSV
EQLETDLRSSKTLTESLQTALCEKERREVELLGEKEQAVTQAAEEARREADARAQEAEKE
LEERREEVRCLEDRLRKAEEESSHSKARLDAFTKAMGSLQDDRDRVLGMYKQLEEKHLQV
MMEKDALIQEAAAENNSLKEELRSLLVQRDDLHAEKAKLSAQLHGYRDDLTQVLTMKESQ
HKQLLSGQLERIATLEKERAELEAKIKSLEGGEAFVQAVERETLSQAGDSGNRQVRDAPG
AEVEKLREQLQAARAQVESLEESLAKEREVQEARQKELKELRWEGGVTRTESETAAERVA
ELARDLLSMEQRLLEEREVAGQLRAQNQAFGQAMASLQGSRDQALSQAQELSLRLEEMSR
VGGQQTPTTGHGGSTAEVWGLKNALSALQNDRERLLEQLQRQHSELTRLGGGELSRLSQE
LEEEKRRADEMVDRMRELDNLRQRENQELEILRMEQVDWQAQAELLKQQTLATLSDRDQQ
VRQLGAMLEEARATRPKPPEEHHQRQSAEPVAVPPSPQLSHVFEENRHLYSQFQGSSQRL
DEAESRCTALQRQLQELHEDKRKGTGEVDSAPGAPQQHSGPSESESLRVDFKELQRRLDE
EQQYRVAVEEQLMAAQDRLKLINQGEWQSAHEGQFSASETAVLIEPPGGSVTRIRGSNRP
GLMRMLRVSFCSRQRTPLLVSLYLLTVHVLLLLCLGGYV
NT seq
9120 nt
NT seq
+upstream
nt +downstream
nt
atgctcagccggctgtcccagggctttaccaacgtcctgcaggagctgtctggggacgag
ccccccgatggagcccctcaggatatgttggtcccccaactcccccctggagatgccccc
ggagcccctgaggagtctgggcctggggtggaggaggagcccctggaaaggctggcccat
ctggagcagctgacagtgcgtctcaaggaggtggtcagagataaggacagccagctggcc
tccttcgaaaagcagctcaagagcgaaagggagacagcgggggcacgcttcactaaacta
aagctgcaggccaaaaccaagatggctgctctgaacaaacaaattactgacctcaaaggg
caggagggagcagcaagctctccagacagctccttcaccagctcagctcctgctgtggag
gaggaactccaggagctgaggaagcagctcagtgaggtctcgacctcggcgaagaacctc
gaggagcgtctccagatgtccgaacaggccctgtgtgaaaaggaagccatacacacggag
caggttcgtgtgcttcaggcagttgtctgtgaaaaagacgtgcgtttccaggagcagatc
cagaagcatgaggacgagctgctgagggtcacagtgcagagccagaacgacgctgagcta
cagcaggctctacgtgcagcccagcgacattgtgaggagcaggaggaagccatgcggtca
cgctgccaggtgctggagatgctgcagggggagctgaacaatgccgaccagcagaaacag
atcctcacggctcagttccgccagatggagcaggagctggctgaggctggcaggcagagg
gaggaggagagacagcagtgggctgggtggtccagccaggccgaggcagagctggcggcc
ctccgagtcaacctggaggcctccgagcgggacagagcagcccagctagccagtctggag
gcctccgagcgggacagagcagcccagctagccagtctggaggcttcagagagagacaga
tcaacccagatggaggacctgacagtgaaactggagtgggccactagagagcgggaggaa
gtgaccaacagagaagtagccaggttggagaaggagcttgctgccttaagagaggagcat
ggagaggggcaaagggcaggagaggccctggctgagttgttgacaggcctgcgctctctg
gctggagagggggccgaggaggacatccctgtacccaccgacccggccctgtgcctgggt
acactggaggcccagctggagaggctgagggtggagcagagggagagcgaggaacgctgc
gcccaggtcacccacaccatggagacattgcaagaacaactggataagcgcaccgcagaa
ggcgaagaggcagttgctaggatacaacagctggagcagcaaattggaatggctgctcgt
gagtcaatggcccagtgtgtgactgacccggctgtggaagacgtgactgatgctgaaaag
gcccaaatattggctctggagcagcagctattggagaaagaccatgagttggctgccctg
cgagagagtcttgtgctggctgaagagcggggctcaaatgatgcattcaaggtaatctct
gatcagattctagaccagcgtgtggacactgccatggccctctgcgacagtcctacagtg
ctgccagacctcttagaagacacacaagaggaggacaccaccctggtggcagaggatagg
tcaagcctgtcagtctccgctgataacgagagcagtccagagctcattgaatcccagtct
gactctcccggagaatctaagggggcctcctctgatgagatggtcacgagcagtgactcc
gaggtggcccacagcagctggaccctcctagaggctgtgaaccaagatgaaggtcagcag
tcgcctcccatactgcagggctttggccagctccagatgcaatcctgggaagagaacagc
tctgagcaggaaacatccacagtccaggtggagtcctcatcagtcatcatccgtgagact
gtgcaggtgcacctcaaacagcagggggtgaccctctctgactctgcccctggacaggtg
tttgcccaggccctggcagatgagatgcagaacaggtacagtgagctcatggctgagctc
cagagattgagagaggctgcctcagagtcacaggagagaacccaaggccttgaggaagag
attcggtccctggcagctgccaaggatgaggcagagtcccaggcccagagatatgaggaa
gagctccagtcagccaggtcagagatggacacggtggcccagcacagtggctctgagttg
gagaggcagagcatggtgatgcatctcctggaggagcagctggacagcctgcagacagaa
ggcagctccaaagatcagaagatccaggccctgcaggcagacctggacgaggctcagcac
tctctctctgagcaggagggccaggccaggatgctgagcacccagctggaagaaggggag
atcacttcctctgagctggagcagaagctccaagacatggaggccagcttgctggagttc
tctcaggctagggacatggccaaagctgtactgtctgagagggacactgagattaacgag
ctgcaactgcgtattacccagaaagagcaggagatgatggagctgagcaacggcttgtct
gccaaactgctccagaccggtgaggagatgttcctgatgagcactgaggtcaagaaactg
aagaagcagatatttgagcttgagaaagctggagaaaatgagaaagcgacaggggagagt
catgtagaggatagtgatgagctcactagtttgcgaaaggacaaagaggatctgacaacc
caagtggccaccattaaaaagaggttgcaggcagccctggtgcagcgcaaagagctgatg
aaaaaagttgcggcgtttgagaaagaggcagatcaaaggaaaggacaagtagggaaagca
acggaggaagcccctgcaagtgtaccagctttagaaaaagacagaaaacaagaggttatg
gcaattgaaactactctcgaagagttcagacaagacttgaggtccaaagaagaggtcatg
gaagttttggaacagaaaatcagccagcaggatcaggttctggaagaaacacttgaaatg
accagaaggctgagtgagggagctcagcagactccagaggctgacacctcatctgaaatc
actgggttgcagtcccaggtggcctcaccggagtcagattgcgaaacactgcaaaagaaa
ctccaggaggcccaggactctcacaaagaaaccatccgcatggccaaagaaaaggacagg
caccaccgcgaacagcttaaacaacaaaaggaagagtacaatgggctgttggagcgtttg
gaggagcaggttggtgaacgagatgggctgttgactagactgagcgagctcaaggaactg
caggcacagaaagaggtgagcacagagaaggaaatacatgccgagctggagaccaatgct
gcagtggagaagattgagaagccagctgcaggagattgggtccaggaagactgggtcaaa
ttttcagctcctgagaatgaagcacaacaacaacaaggtgataaacccattaccagtgcc
gaggaaccctctcagttactttcagctgacattgaggcctcattacaagctctgaaagaa
gaggtccaggctgagaaggcatcttgtacagagttggagggccaactgcaggagagtcag
gctagcctgtcactcagggaaagtgagcttctagtgctgggcaaagagctgcaggccctg
agagagaaggagagccagattgaacatgtctatgaggagttggaggctctgagggagaag
tgtctccaggctcagacctatgcagaagctgtgaaagcagagttggaggctgcagccaag
ggagccgcatcagactccgctgagtccaccattgccgtcctgcagacagaggtggaggac
ttcaagcagttcctgagcaacaagaacaatgagatcatggagcttagccagcagctgggt
gagcaaagctccctcgtccagtctatgcaagagacagtgtatgagaaggaccagtcgatc
gcctccctgcaagaaggcctgagagcagagaaggaaaggagccagagactggaggccgag
gtcccccagaagcaggaggaagagaaaggcagcgaggccaagatcctgcagcttcagcag
aagctcaaagctgcccttatctcccgcaaagaggccctcaaagagaacaaaagccagaaa
gaagagttggcctccactgataaagtcatcactaaactgcagcagaggatggaggctaga
gaagtcgagctggagaagctgagagcagaaagagagaggctgatagaggaggtcgatcgg
accttggtggagaaccagagccttgggggatcttgcgagagcctcaagctggccatggag
ggtatgctgacagagaaagacttctgtaaaagagaggcagagtctgccagagaggaggct
gcccgggcatgcagagaatgggaggacaaggtgcatgggatgaaggatgagtatgagact
ctgctaaagtcctatgagaacgtgagtgatgaggcagagcgtgtgagacgtgtgctggaa
gctgctaggcaggagaggaaggagcttgttgctagagccaggacccacgaggcagccaag
caggaggctgaacggcagaaagaagaggcccagaaagaggtggacactgtcaaagacaag
atgaggaagtttgccaagaccaagcagcaaaaaatcatggatttagaggaggagaatgag
agactccgagagatggatgaaaagaaaggaataagaagagaggacaaggcactcaaagga
gaacttgaaagactcaaagaagagtttgaggctctgaaagctgatttgaatgccactacg
gcacagagggactccttagaacagcagggtgttgagttaagggagcaactagcccaagag
ctagagaaaggggatagattagccccagataaaacccccagctctgatgatgtagtggag
gagactattgttgcccagcagcctagtacagtcatgactaaaactacccaagagccagtt
aagagccagcctcaggacatagagccacatagtcaggccatagagtctgaggtagctcca
cctgaaacgccctctgttgaggagatggtgaagaccgaaataactgaaaatacacaggcc
ctaattgatgagaaattgagcaaaatggaggaagccctacagtcagagagggaactgagg
caacagcgcgaggctgaactcactgccgagctggcctctctggagcagcgccttcaggag
agtaaagaaaaggaacagacccagagagaggagccagtgaagacggacatgtctgaaagt
gaactggccacaattgagggaaaacggagggaaatggaggcagccctacattcagagagg
gaaccgtggcaagagagtgaggctgaactcaaggctggactagcctctctggagcagctc
cttcaggagagtaaagttaaggaacagaggctgatggaggagagctctaaaagggaagcc
caactccaggagctccacagcagcctggaggtagaaaaggacgacctagaggagtgtctg
atggaccagctggcccagctgaatggcagcatcgccggctaccagcaggacgcggcagac
agccgggagcgccttgcggagctgcagcgggaggtggagagactggagagggagcgtgcc
gaactggaagccctggccgagagcgagagggaccgggcagccaggctggaggaggacaag
aggcaggcccagagagagagggctgaggcagaggccgagtcagggaaacagagggagctg
gagcagcagctgaagtccgcccagagggtgaaagagggcagccagagtcgggcaaagcag
ctggaggagctgctgagagagaagcagctggaggtgcgccagatgcagaaggactgcatc
cagtaccaggaaaggatcagcgagatggccagggagggcaaggctttgcaactgggcagc
aacgaggtccacaaagagcttgggcaagcctatctggagaggaccaaagtcacagacgct
ttgaagaaggctgaggctgagctatctagctgcaaagcccagctggttgagacccagaca
gaggccagccaggccaaagctgagaggagagcctgtgagcagaccgctctacagagagag
gctgagttgaaagcagaggcagagcagagcctggactctgtgaggttcaggctgggagct
gagctgaagcagattgagctgaggttggaggagtcttaccgggagaaggagagagaggag
gatgccacccgggaggcaaaagagctggctgacaccgctgagagacaggcccagcagatg
caggcccgtctggatgagtctctggcccgactggctgccttctcgcgctgtatgtcctcc
ctgcaggacgacagggaccgcgtgctggatgagacccggcagtgggagagtcgcttcaac
agcaccctccaggggaaggaggccgaggtgcgggagggagagacccgatccagagatctg
gctgaaaagctgcagaaagagaccgcacagagagaagagctacagcttacagtggacaga
ctgcagaaagcagacgagcagtggcagctgaaatgggagcaggaagagaagaagctccgt
gagaaccaagctgccatggagcaggagaggggagagcttcagaagtccctagcccagacc
atgacctccctggctgacactcgcgcccagctggcttccctggagagcgaggcggagggg
ctccgccacagaacccaggccctggaagaggcagttgggaagctgcagggagagaccaat
gaggtcaggtcccagctgaaggagagggaagcagagggaaggaggctgggcctgagcgtg
gaacaactggagacagacctgcgctcctccaagaccctgacagagagcctgcagacagcg
ctgtgtgagaaggagaggagagaggtagagctgctgggggagaaggagcaggccgtgaca
caggctgcagaggaggccaggagggaagctgacgccagggcccaggaggctgagaaggag
ctggaggagaggagagaggaggtgcggtgtctggaggaccggctgcggaaggcagaggag
gagagcagccacagcaaagccaggctggacgccttcaccaaggccatgggctctttacag
gacgacagagacagagtacttggcatgtacaaacagctggaggagaaacatctgcaggtg
atgatggaaaaagacgctcttatccaggaggctgctgcggagaataacagtctgaaggag
gagctgcgctccctattggtccagagggacgacctccacgcagagaaggccaagctatct
gcccagcttcacggctacagggacgaccttacccaggtcctcaccatgaaggagtcccag
cacaagcagctcttgtccggccagctggagcgcatcgctaccctggagaaggagagagct
gagctagaggctaagatcaagagcctggagggaggggaggcttttgttcaggcggtggag
agggagacactcagccaggctggtgatagtggaaacaggcaggtgagagacgctcctggg
gcggaggtagagaagctgagggagcagctgcaggctgccagggcccaggtggagagcctg
gaggagagccttgccaaggaaagagaggtgcaggaggctcggcagaaggagctgaaagaa
ctgcgttgggagggaggggtgacgcgcacggaatcggagacagcggctgagagggtggct
gagctggcccgagacctgctgagcatggagcagaggctgttggaggagagggaggtggcc
ggccagctccgggcccagaaccaggcgttcggccaggccatggcgtcactgcagggcagc
agggaccaggcactcagccaggcccaggagctcagcctcagactggaggagatgagcagg
gtagggggccagcagacacccaccacaggccatggaggatccactgcggaggtgtgggga
ctgaagaacgctctatcagccctgcagaacgacagggagagactgttggaacagctccag
cggcagcactcagagctcactcgactgggaggtggagagctgtctagactcagccaggag
ctagaggaggagaagaggagggctgatgagatggtggacaggatgagggagctagacaac
ctgaggcagagggagaaccaggaactagaaattctcaggatggagcaggttgactggcag
gcccaggcagagctcctgaagcagcagaccctggccaccctctcagaccgtgaccagcag
gtccgccagctcggtgccatgttggaggaggcccgcgccaccaggcccaaaccaccggag
gaacaccaccagagacagtctgctgagcccgttgctgtccctccctctcctcagctctca
catgtgtttgaggagaaccgccatctctactcccagttccaaggcagttcccagaggcta
gacgaggcagagagccgctgcactgccctccagaggcagctccaggaactgcacgaagac
aagcgcaaggggacaggggaagtggacagtgcccccggagctcctcagcagcacagtggc
ccttcagagagcgagagcctcagggtggattttaaagagctccagcgcagactggatgag
gagcagcagtatagggtggctgtggaggagcagctaatggccgcccaggaccgcctcaaa
ctgatcaaccagggtgaatggcagtcggcccatgaagggcagttctctgcttctgagaca
gctgtcctcattgagccaccaggaggctctgtcacccgaattcgggggagcaacaggcca
ggcctgatgagaatgctgcgcgtgtccttctgctctcgccagcgcacacccctgctggtg
tccctctacctgctcaccgtgcacgtgctgctactgctctgcctggggggttacgtttag
DBGET
integrated database retrieval system
