KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392616
Entry
139392616         CDS       T10872                                 
Name
(RefSeq) zinc finger CCHC-type and RNA-binding motif-containing protein 1-like
  KO
K13154  U11/U12 small nuclear ribonucleoprotein 31 kDa protein
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ocla03041]
    139392616
Spliceosome [BR:ocla03041]
 Other splicing related proteins
  Minor spliceosome components
   Minor spliceosome specific factors
    139392616
SSDB
Motif
Pfam: RRM_1 RRM_5 zf-CCHC RRM_7 SET_assoc RRM_occluded RRM_Rrp7 BRAP2 RNA_bind zf-CCHC_3 SpoIIIAH DUF4661 zf-CCHC_6 DDRGK
Other DBs
NCBI-GeneID: 139392616
NCBI-ProteinID: XP_070996811
LinkDB
Position
33:29557829..29561047
AA seq 222 aa
MSGGLAPSRSTVYVSNLPFSLTNSDLHKLFTKYGKVVKVTIVKDKETRKSKGVAFVLFLD
KESAQSCFRSLNNKQLFGRTVKASIAIDNGRATEFIRRRNYTDKSKCYECGDTGHLSYAC
PKNLLGEREPPKKKEKKKKKKVEEPDEVEEEESEEEGEDPALDSLSQAIAFQQARLEEEQ
HRRKQTAFVAEEAGQEASTSDDSKKPRIKKSVYFSDEEELSD
NT seq 669 nt   +upstreamnt  +downstreamnt
atgagtggtggtttggctcccagtagaagcacagtctatgtgtccaacctgcccttctct
ctaaccaacagtgatctacacaagcttttcaccaaatatggaaaagttgtgaaggtgaca
atagtcaaagataaagaaacacgcaaaagtaaaggtgtggcttttgtgctcttcctggac
aaagagtctgcacagagctgctttagatcgctcaacaataaacagttgtttggaagaaca
gtgaaagcgagcattgcaatcgacaacgggcgagcaactgaatttatcaggaggcgaaac
tacacagacaagtccaaatgttacgaatgtggggatacagggcacttaagctatgcatgc
cccaaaaacttgcttggtgaacgagaacccccgaagaagaaagaaaagaagaagaagaaa
aaggttgaagagcctgatgaagtagaagaggaggaaagtgaggaagagggagaggaccct
gctcttgacagcttaagtcaagccatagcattccagcaagcacgacttgaggaggagcag
cataggcgaaagcagacggcctttgtggctgaggaggccggtcaggaggcttccacatcg
gacgactccaagaaacccaggatcaaaaagagtgtctacttcagtgacgaggaagaactg
agcgactga

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