Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392649
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Entry
139392649 CDS
T10872
Name
(RefSeq) RNA polymerase II-associated protein 3-like isoform X1
KO
K23002
RNA polymerase II-associated protein 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocla03021
]
139392649
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
139392649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
RPAP3_C
TPR_2
TPR_8
TPR_11
TPR_19
TPR_BSK1_C
TPR_16
TPR_12
TPR_9
TPR_17
ARM_TT21_4th
ANAPC3
TPR_10
Motif
Other DBs
NCBI-GeneID:
139392649
NCBI-ProteinID:
XP_070996878
LinkDB
All DBs
Position
33:complement(17591208..17597463)
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AA seq
666 aa
AA seq
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MLVGMSENKAIELQLQMRQNAEDLHNFMKDLDSWETDIKRKDEQLRTGSFSKSQKSLPPV
RNKDYKKKREKKKASDNNANTEPKQARRIKSHDYQSWDKFDVDKVLESMDKEDSAAESND
SESEDSGVPATDQDKVLAEKEKGSQLFKEGKYEDAIECYTRGMGADPYNPVLPTNRAACF
FRLKKFAVAESDCNLSIALDSNYFKAFARRGASRFALQHYESALEDYVMVLKLDPGNLEA
HKEVMKCKEVIAKLGGKAESPEAAVVTPSVVDVKQQQLMEEQQRRQEAVVQKDRGNAYFK
EGKYEAAVEYYTKGMEADSTNVLLPANRAMAYLKLQRYKEAEEDCSKAIALDGTYSKAFA
RRGTARAALGLLKQAKEDFEEVLKLEPGNKQAFYEMKKIAIDMDTSGLLATEEHAQRRTV
QPINKPPDLQSTKPLSRVDIEEVCGKILVQEESSAVLTSTTAPHVRHQKTTSIAYTVREG
QASPPSTSPSAKIPKIEETSNLPSHSPVKGPVRYAVRAQTQQHREATVSEPTEPPATPST
ELVPPAPTNSFQLEADLRKIGNGPEVIYKYLKQIQPQAFAKIFQSSLEPDMLNQILRTLQ
SFYIKKEEPPVILEILRNLAGVRRFDMAVMFMSNPEKKVLQELFDFLRQAGLEDVSVGAL
QKKYGV
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgctagtaggcatgtctgaaaacaaagccattgaactccaactgcaaatgcgacaaaat
gcagaggacctgcataacttcatgaaagatcttgacagctgggaaactgacataaagagg
aaggatgagcaactaagaactgggagctttagcaagtctcaaaaaagcctgccaccagtg
cgaaacaaggactacaaaaagaagcgagagaaaaagaaggcatcagacaacaatgcaaat
actgaaccaaaacaagcacgcaggataaagtctcatgactatcagtcatgggacaaattt
gatgtggacaaggtattggagtccatggataaagaggacagcgctgctgaatccaatgac
tctgagtctgaggattctggggttcctgctactgaccaagacaaggtgcttgctgagaag
gagaaaggcagtcagctgttcaaagaagggaagtatgaggatgccattgagtgttacacc
agaggcatgggcgcagacccttataaccccgttctgcctacaaaccgagctgcctgcttc
ttcagactcaaaaagtttgctgttgccgagtctgactgcaacttgtccatcgctttggac
agtaactacttcaaagcatttgcacgaagaggagcgtctcgattcgccctgcaacattat
gaatctgccctagaagattatgtaatggttctcaagctggatcctggaaacctggaggca
cataaggaagtgatgaaatgcaaagaggtcattgctaaactgggtggaaaggcagaaagc
ccagaggctgcagtggtgacgccatctgtggtggacgtcaagcaacagcagctcatggag
gaacagcagaggagacaggaggcggtggtgcagaaagacagggggaatgcatacttcaaa
gaggggaagtacgaggctgcagtagagtactacaccaagggcatggaagcggacagcacc
aacgtcctcctgcctgccaaccgggccatggcttacttaaagctgcagagatataaagag
gctgaggaggactgtagtaaagcaatagccctggatggcacctattcaaaggcctttgcc
cgcagagggacagccagggctgctctgggactgctcaaacaagctaaagaagattttgag
gaggtcctgaagctagaaccaggaaacaagcaggcattttatgagatgaagaagattgca
attgacatggacaccagtggtctgctggcaacagaagagcatgcacagcggagaacagta
cagccaattaacaaaccacctgacctgcagtcaaccaagccattgagtagagtggacatt
gaagaggtttgtggaaagatcctggtccaggaggagtcctcggctgtgttgacttcaacc
acagccccccatgttaggcaccagaagaccacctccattgcatacaccgtgagagagggt
caggcctcacccccctctacctcccccagtgctaagatcccgaagattgaagaaacatca
aacctcccctcacattcccctgtcaaagggcctgtgaggtatgctgtgagagcacagaca
cagcagcacagggaggcaactgtcagtgaaccaacagaaccgcctgctacaccatcaact
gagctcgtacctcctgcccccaccaacagcttccagctagaggcagacctaaggaagatt
ggaaatggccctgaagtcatctacaagtatttgaagcaaatccagcctcaggcttttgca
aagatcttccagagctctcttgaaccagacatgctcaatcagattctaaggacgttacaa
agcttctacatcaagaaggaagagccacctgtcatactggagatcctcaggaatctggcc
ggtgtgaggcggttcgatatggctgtcatgttcatgtccaaccctgagaagaaagttcta
caagaattgtttgactttcttcgtcaagctggacttgaggacgtttcagtaggagccctg
caaaagaagtatggagtgtga
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