Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392670
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Entry
139392670 CDS
T10872
Name
(RefSeq) 26S proteasome regulatory subunit 7
KO
K03061
26S proteasome regulatory subunit T1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
139392670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ocla03051
]
139392670
Proteasome [BR:
ocla03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
139392670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
OB_PRS7
AAA_lid_3
AAA_22
AAA_2
AAA_5
AAA_16
DUF815
nSTAND3
AAA_14
RuvB_N
AAA_28
AAA_7
Prot_ATP_ID_OB_C
AAA_33
TIP49
AAA_18
Mg_chelatase
RNA_helicase
Sigma54_activ_2
IstB_IS21
Flavodoxin_3
AAA_24
Motif
Other DBs
NCBI-GeneID:
139392670
NCBI-ProteinID:
XP_070996922
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Position
33:complement(26700981..26705567)
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AA seq
434 aa
AA seq
DB search
MPDYLGGDQRKIKDAKEEEDKPIRSLDEGDIALLKTYGQSTYSRQIKQVEDDIQNLLKKI
NELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFA
KFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGG
CKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIR
VIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTM
LELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHA
RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKS
YAKFSATPRYMTYN
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgccagattatttgggaggcgatcaaaggaaaatcaaagatgccaaagaagaggaggat
aaacctatcagatctttggatgaaggagacattgccttattgaaaacttatggccagagc
acttactccagacagattaagcaagtggaagatgacatccaaaacctgctcaagaagatc
aatgaactaaccggcattaaggaatcggacactggcctggctccccctgcactttgggat
ctggctgcagacaaacagactctgcagagcgagcagccactgcaggtggcaagatgcaca
aagatcatcaatgctgactctgaagatccaaagtacatcatcaatgtgaagcagtttgcc
aagtttgtggtggacctgagtgaccaggtggcccccactgacatagaggagggtatgaga
gtcggtgtggacagaaacaagtaccagatccacattcctctgcctcccaagattgacccc
acagtcactatgatgcaggtggaggagaagcctgatgtgacctacagtgacgtgggtgga
tgtaaagagcagattgagaagctcagggaggttgtggagaccccactgctccatcccgag
aggtttgtcaacctgggtattgagcccccgaagggggttctgctgttcggcccacctggt
acaggtaaaaccctgtgtgccagagccgtggccaaccgcaccgatgcctgcttcatcagg
gtcatcggctcagagctggtccagaaatacgtgggagagggtgccagaatggtgcgggag
cttttcgagatggccagaaccaagaaggcatgtctcatcttcttcgatgaaattgacgct
attggaggggcccgttttgatgacggtgccggtggggacaatgaggtccagaggaccatg
ctggagctcatcaaccagctggacggcttcgaccccagggggaacatcaaggtcctgatg
gccaccaaccggcccgacaccctggacccggccctcatgaggcccgggcgactggacagg
aagattgagttcagcctgccagacctggagggtcgtactcacatcttcaagatccatgcc
cgctccatgagcgtggagagagacatccgcttcgagctgctggctcgtctctgtcccaac
agcacaggtgccgagattcgcagcgtgtgcacggaggcgggtatgttcgccatccgcgcc
cgccggaagatcgccactgagaaggacttcctggaggcggtcaacaaggtcatcaagtcc
tacgccaagttcagcgccaccccaagatacatgacctacaactaa
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