Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392720
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Entry
139392720 CDS
T10872
Name
(RefSeq) neuroepithelial cell-transforming gene 1 protein-like
KO
K20683
Rho guanine nucleotide exchange factor 3/8
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139392720
Membrane trafficking [BR:
ocla04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
139392720
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH_5
PH
PH_13
Motif
Other DBs
NCBI-GeneID:
139392720
NCBI-ProteinID:
XP_070997021
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Position
33:17052488..17060635
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AA seq
561 aa
AA seq
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MVAYDELGSLVPIKRTLQAIDCQNRGNKDSEEPSNKRVRPLGRVTSLANFISPVRNGAVR
RFGQTIQSISFRGDGNSGKTPGVPQKPCSKAAAPTPPKRRNSMLWSETLDVHQKGTFSTK
EIKRQEAIFELTRGEQDLIEDLQLARKAYHDPMLKLSIMSEEELSHIFGDLDAYIPLHED
LLAQLATATGPDGTVGQIGQIVVSWLPGLNAYRDYCSNQVAAKALLDQKKQDRRVQDFLQ
RCLESPFSRKLDLWSFLDIPRSRLFKYPLLLKEILKHTAPEHPDTPHLELAITIIQGVLS
DINMKKGESESQYYIDKLEYLDDRQRDPRIDQCKSLLCHGELRNKSGTKLHVFLFTELLV
MTRPVTRNEHHCFQVYRQPIPVQDLVLEDLQDGDVKMGGSFRGAFSNSDKAKNIFRVRFH
DPSRGQSHTLQVNDVFHKQQWLNCLRSAISVHHPADVTTPTSSPAADAHSKRHSSKISSV
VHTEEADENCPLTPAGATSASSSLCGDETPSPTSTSPSSTSPSSRSSSSSSSPLSSPSPK
HKTKKDKRSLCALGKRKETMV
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggtggcttacgatgaactgggtagcttggtgcctatcaaacggactctacaagctata
gactgtcagaaccgaggcaacaaagactcagaggaacccagcaacaagcgtgtccgtcct
ctcggcagagtgacctcgctggctaacttcatctcccccgtgaggaatggggccgtccgg
cgcttcggccagaccattcagtccatatccttccggggcgatggcaatagtggcaagacg
ccgggcgtgccccagaagccatgcagtaaggcggcggcgcccactccgcccaagagacgc
aacagcatgctgtggtcagagaccttagacgtccaccagaagggcaccttctccaccaag
gagatcaagagacaggaggccatatttgagttgactcgcggagaacaggacctgattgag
gacctccagctcgcacgcaaggcgtaccacgaccccatgctgaagctgagtatcatgtcg
gaggaggagctgagccatatcttcggggacctggatgcctacatccccctccacgaggac
ctgctggcccagctggccacagccaccggccccgacggcaccgtgggacagataggacaa
atcgtcgtcagctggttgccagggctgaatgcataccgagactactgcagtaaccaggtg
gcggccaaggccctgttggaccagaagaaacaggaccggagggtgcaggacttcctgcag
cgctgcctggagtctcccttcagcaggaagctggacctgtggagcttccttgacatcccc
cgctcccgcctgttcaaataccccctcctgctcaaagagatcctcaaacacacggcgccc
gagcaccctgacacgccccacctggagctagcgatcaccatcatccagggtgtgttgtct
gacatcaacatgaagaagggtgagtcagagagccagtactacatagacaagctggagtat
ctggacgacaggcaaagagacccgcgcatcgaccagtgcaagagtctgttgtgtcacggc
gagctacgcaacaagagcggaacaaagctgcatgtgttcctgttcacagagctgttggtg
atgacccggcctgtgacgcggaacgagcaccactgtttccaggtgtaccggcagccaatc
ccggtgcaggacctggtgctggaggacctgcaggatggagacgtcaaaatgggtggctcc
ttcagaggagcattcagtaactcagacaaagccaagaacatcttccgtgtgcgtttccat
gacccgtctcggggccagtcccacacgctgcaggtcaacgacgtcttccacaagcagcag
tggctcaactgcctgcgcagcgccatctccgtccaccaccccgccgacgtcaccacgccc
acttcctccccggcagccgacgcccactccaagcggcactcctccaaaatctcctccgtc
gtccacacggaggaggccgacgagaactgccctttgacgcccgcaggtgcaacctccgcc
tccagttcgctatgcggggacgagacccccagtcccacctcaacttctccctcctcaacg
tctccctcctcccgctcctcatcctcctcttcatcaccactatcctccccgtcgcccaaa
cacaaaaccaaaaaggacaagcgctccctctgtgctttagggaagaggaaggagaccatg
gtgtaa
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