Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392722
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Entry
139392722 CDS
T10872
Name
(RefSeq) ATP-binding cassette sub-family D member 2
KO
K05676
ATP-binding cassette, subfamily D (ALD), member 2 [EC:
7.6.2.4
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla02010
ABC transporters
ocla04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
139392722
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
139392722
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139392722
Enzymes [BR:
ocla01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
139392722
Transporters [BR:
ocla02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD2 subgroup
139392722
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane_2
AAA_21
AAA_23
AAA_29
Rad17
SMC_N
Adeno_IVa2
ORC-CDC6-like
AAA_27
RVP
AAA_5
nSTAND1
ATPase_2
Motif
Other DBs
NCBI-GeneID:
139392722
NCBI-ProteinID:
XP_070997023
LinkDB
All DBs
Position
33:complement(8096346..8115006)
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AA seq
425 aa
AA seq
DB search
MRQLQKCYRALAEQMNLILSKRLWYIMVEQFLMKYVWSSCGLVMVAVPIITATGFADSET
ADGQTQVLVSERTEAFTTARNLLASGADAIERIMSSYKEVTELAGYTTRVYNMFLVFGEV
QRGVYKRSSASTMGTGEKKIVARPEMHIDGPLEIKGRVIDVDNGIVCESVPIITPNGDIV
VSSLNFKVEEGMHLLITGPNGCGKSSLFRILSGLWPVYGGLLHKPSPQHMFYIPQRPYMS
IGTLRDQVIYPDSLKDMHDRGYRDTDLEVILDIVNLNQIVTREGGWDAEMDWKDVLSGGE
KQRMGMARMFYNRPKYALLDECTSAVSIDVEGKIFQAAKDAGISLLSITHRPSLWKYHTH
LLQFDGEGGWRFEQLDTATRLSLTEEKQRLESSLAGIPKMQHRLNELCKILGADSALKTA
DLAEE
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagctgcagaagtgctaccgggccctggcggagcagatgaacttgatcctgtcc
aagcgtctgtggtacatcatggtggagcagttcctcatgaagtacgtgtggagtagctgt
ggactggtcatggtggctgtgcccatcatcacagctaccggcttcgctgacagcgagact
gccgacggtcagactcaggtgctggtgagcgagaggacggaggccttcaccaccgcacgc
aatctcctggcctctggagctgacgccatcgagaggatcatgtcctcctacaaagaggtc
acagagctggcgggctacacgacacgcgtctacaacatgttcctggtgtttggcgaggtg
cagaggggcgtctacaagcgctcgtccgcttcgaccatgggaacaggagagaagaagatc
gtggccaggccagagatgcacatcgacgggcctttggaaatcaaaggaagagtcatcgat
gtggacaatggcatcgtgtgtgagagtgtccctatcatcactcccaatggagacatagtg
gtctccagcctcaacttcaaggtggaggaaggtatgcacctgttgatcacaggtcctaac
ggctgtgggaagagttctctgttcaggatcctcagtgggctgtggcctgtctatgggggg
ctgctgcacaagccctccccacaacacatgttctacataccacaaaggccgtacatgtcc
attggaaccctgagagaccaggtgatctacccagactctctaaaggacatgcatgacagg
ggctacagagacacggacctggaggtcatactggacatcgttaacctcaaccagatagtg
acccgcgagggcggttgggatgcagagatggactggaaggatgtgttgtctgggggagag
aaacagaggatgggcatggctcgcatgttctacaacaggccaaagtacgccctgttagat
gagtgcaccagtgctgtcagcattgacgtggaggggaaaatattccaggctgcaaaggat
gctgggatatccttactgtcaatcacccatagaccctccctctggaagtaccacactcac
ctgttacagtttgatggtgagggaggatggaggttcgagcagctggacaccgctacgcgt
ctctccctgaccgaggagaaacaacgcctcgagtcttcacttgcaggaatacccaagatg
caacacagactcaacgaactctgcaagatcctgggagcggactcagccctcaaaacagcc
gacttagcagaggaatga
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