Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392762
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Entry
139392762 CDS
T10872
Name
(RefSeq) RAD50-interacting protein 1
KO
K20474
RAD50-interacting protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139392762
Membrane trafficking [BR:
ocla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
139392762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
Motif
Other DBs
NCBI-GeneID:
139392762
NCBI-ProteinID:
XP_070997108
LinkDB
All DBs
Position
33:complement(30017250..30030323)
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AA seq
786 aa
AA seq
DB search
MAAPSAEQQNGQSDESDLQSPISTNYEDSETESGEGALPDYVVELIEKEIGVDLKSLKKV
SALLEKLTAENKLLEEQVLTVSSSVPLRVSAALSAAEESRVSLEGLLQRERVLSNTLIQH
LQGAQPWADSLGRTLEQLDNTEKHMKYLQCLSRIEELSDSIQQCLITNSIWEAVVAVGSM
ASLDVGLKQSGCSHLQAFLRETLCFWHKIIKDRLAGDFEELLIQLHWPFISPPTQSLSPP
ANAQELHSQLELLVAQLLSLQTSDDLISEKPTSVSRVGLPPTTPLSLPVQIMLLPLSKRF
RYHFTGNRQTNSLNKPEWFLTQVLMWMGNSSNFMEEKIQPILDRNGANVNAKVELCRGLL
TLAQEKLALDAPRLLYDDALFCHLVDEILQFERELRTTHSYPSTLPGVLHVLLEEVVLQK
WLTVERKMAIEKVDAMLSAEGAWSSQYKDISDMDELKAPDCAETFMTLLLVITDRYRALP
CPRAQLRFLALQRELVDDFRIRLTQVMKEESRNPLGARYCAILNAANYISTVLGDWGDNV
FFLQLQQSAVALGEEELLGPLGVTESGRLASLEGSLFEGLLGLLERLRGDMLGRLLEAVM
RDVQKKAQPYCRDRWLSLPSQCDQATMSLSSLACPLMLCLRDHLLQLQQMLCLPLFQTGW
QDLAERLDLFLYQNVILYNHFNEGGAAQLQFDMTRNLFPLFGHYCKRPENFFKHVKEACV
ILCLNVGSALLLRDVLRQAEEDEEQPGIPDGKQPSPTSALNELGVYRLAPCDVLILLNLR
ASWPGK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccctctgcagagcagcaaaacggccaaagtgatgaatctgatctacaaagc
cctatatcgacaaattatgaagactccgaaacagaatcgggggagggagcactccccgac
tacgttgtcgaattgatagagaaagaaatcggagtggatctgaagtcgctgaagaaagtt
agcgcgctcctggagaaactgacagcggaaaacaagttgctggaggagcaggttctgacg
gtgtccagttcggtgccgctgcgggtgtcagcagcgctgtctgctgccgaggagtcccgt
gtgtctctggaaggtttgctccagcgggagagggtcctgtccaacaccctgatacagcac
ctgcagggcgcccagccctgggcagacagcctgggacggaccctggaacagctggacaac
acagagaaacacatgaaatacctgcagtgtctgtcacgcattgaagaactcagtgacagc
atccagcagtgtctgatcaccaacagtatatgggaggcagtggtggcggtgggcagcatg
gccagtctagatgtgggcctaaagcagtctggctgctctcatctccaggccttcctcaga
gagacactatgcttctggcacaagatcattaaggaccgactggctggtgattttgaggag
ttgctgatccagctccactggccgttcatctctcctcccacccagtctctctccccccct
gccaacgctcaggagctccacagccagctggagcttctggtggcccagctcctgtctcta
cagacctctgatgatctcatatcagagaagccaacctctgtgtcccgtgtagggttgccc
ccgacgacacccctgtctcttcctgtccagatcatgttgcttcctctgagcaagaggttt
cgataccacttcactggaaaccgtcagaccaattcactcaacaagcctgagtggttcctg
acccaggtcctgatgtggatgggtaacagctccaacttcatggaggagaagatccagccc
attctggacagaaatggagctaacgtcaacgccaaggtggagctgtgtcgcggtctactc
accctggcccaggagaagctagcgttggatgctccacggctgctctacgacgacgctctc
ttctgccacctggtggatgagatcctgcagtttgagagggagctgcgcaccacccactcc
taccccagcaccctgcccggagtgctgcatgtactgctggaggaggtcgtgctgcagaag
tggctcactgtggagaggaagatggcgatagagaaggtggatgccatgctgtctgctgag
ggggcttggagctcccagtacaaagacatcagtgacatggatgaactcaaggctccagac
tgcgctgagaccttcatgaccttactgctggtcatcactgaccgctaccgtgccctcccc
tgccctcgtgctcagctgcgtttcctggcgctacagagagagctggtggacgacttccgt
atccgcctcacccaggtgatgaaggaagagtcccgtaacccgctgggcgctagatactgt
gctattctcaacgctgccaactacatctccaccgtgctgggggactggggagacaacgtg
ttcttcctgcagctgcagcaatcagctgtggccctgggggaggaggagctgttggggccg
ctgggggtcactgagtccggccgtctggcctctctggaggggtctctgtttgaggggctc
ctggggctgctggagaggctgagaggagacatgctgggcaggttactggaggctgtcatg
agggacgtacagaagaaggctcagccctactgcagggacaggtggttgtctctgccgtcc
cagtgtgaccaggccaccatgtccctgtccagtttagcctgtcctctgatgctctgtctc
agggaccacctgctccagctgcagcagatgctgtgtctgcctctcttccagacgggctgg
caggacctggctgagaggctggacctcttcctctaccagaatgtgattctgtataaccac
ttcaacgaggggggtgccgcccagctccaattcgacatgacaaggaacctcttccctctg
tttggacactactgcaagaggcctgagaacttcttcaaacatgtgaaggaggcctgcgtc
atcctgtgtctgaatgtgggctcagctcttcttctacgagacgtcctaaggcaggctgag
gaagacgaggagcaaccagggataccggacggcaagcagcccagccctacgtcagccctc
aacgagctgggggtctaccgcctggccccctgtgacgtcctcatcctgctcaacctcagg
gcctcctggccgggaaagtga
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