Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392830
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Entry
139392830 CDS
T10872
Name
(RefSeq) keratocan-like isoform X1
KO
K08123
keratocan
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ocla00535
]
139392830
Proteoglycans [BR:
ocla00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
139392830
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_LRWD1
LRR_9
Motif
Other DBs
NCBI-GeneID:
139392830
NCBI-ProteinID:
XP_070997216
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Position
33:complement(22945171..22952595)
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AA seq
360 aa
AA seq
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MKTPMVQIQGRLSVKMALLLAFSSVLLLVGPALAQSPDMSYEDYMAQLQACPKECRCPPS
FPNAVYCDNKALKRIPTIPPHTWYLYLQNNLIDVLSTDALRNATQLRWINLNRNRITSEG
MEEGALAAMLRLVHLYMDDNLLSSVPANLPSSLEQLRLSRNRISKIPAGVFSGLDRLTLL
ELQGNKLQDDAVTEVSLKGLSNLVQINLAKNQLTTMPLGLPITITQLFLDNNAIEKIPAD
YFKGLPKVAFLRLNRNKLGNGGLPKYVFNMSSILDLQLSHNQLTQVPMIPSGLEHLHLDH
NQIKSVNGSDICPVSADALEGYVIETAPKLRYLRLDGNEVKPPIPRDLMMCFRLLRSIVI
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaccgatggtacaaatacaggggaggctgagtgttaagatggcgcttctcctg
gccttttcctccgtcctgcttctggtcggtcccgctctggcccagagcccggacatgtcc
tacgaagactatatggcccagttacaggcctgtcccaaagagtgccgctgcccgcccagc
ttccccaacgccgtctactgcgacaacaaggctctgaagcgcatccccaccatcccccca
cacacctggtatctgtacctgcagaacaacctcatcgacgtactgtcaacagatgctctc
cgcaacgccacgcagctgcgctggatcaacctcaaccgcaaccgcatcaccagcgagggc
atggaggagggtgccctggccgctatgctccgcctggtccacctctacatggacgacaac
ctgctgagctccgtcccagccaacctgccctccagcctggagcagctgcgcctctcccgc
aaccgcatctccaagatccccgccggggtgttctcaggtctggatcggctgacactgctg
gaactgcaggggaacaagctccaggatgacgcagtgaccgaggtgagcctcaagggcctg
agcaacctggtccagatcaacctggccaagaaccagcttaccaccatgcccctgggcctc
cccatcaccatcacccagctcttcctggacaacaacgccattgagaagatccccgctgac
tacttcaagggtctacccaaggtggccttcctcaggctcaaccgcaacaagctgggaaac
ggcgggctgcccaagtacgtgttcaacatgtccagcatcctggacctgcagttgtcccat
aaccagctaactcaggttcctatgatcccctcaggcctggaacacctccacctggaccac
aaccagattaagagtgtgaatggatctgatatctgccctgtgtcggctgatgctctggag
ggctatgtcattgagaccgctcctaaactccgctacctccgtctcgatggcaatgaggtc
aagccaccaatacccagagacctcatgatgtgcttccgtctcctcaggtccatcgtcata
taa
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