Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392861
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Entry
139392861 CDS
T10872
Name
(RefSeq) GATOR2 complex protein MIOS-like
KO
K20407
SEA/GATOR complex protein SEA4/MIOS
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
139392861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139392861
Membrane trafficking [BR:
ocla04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
139392861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIOS_WD40
MIOS_a-sol
zinc_ribbon_16
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_WDR5
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
139392861
NCBI-ProteinID:
XP_070997277
LinkDB
All DBs
Position
3:30418963..30429104
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AA seq
878 aa
AA seq
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MSGSKPDILWSPHHADRYVICDSELGLYRIGPVGSGETKAGALPLSEETAATLLAINSDT
PYMKCVAWYPKHEPECLLAVGQANGRVVLTSLGQSHNSKCKELMGKEFVPKHARQCNTLA
WNPLDSNWLAAGLDKHRADFSVLIWDISSKFSPEASVATEKIRLSSGDTDSGLVVTKPLY
ELGQNDACLSLCWLPRDQKLLLAGMHRNLAIFDLRNTSQKTFVNTKAIQGVTVDPHFPDR
VASFFEGQVAIWDLRKFEKPVLTLTEQPKPLTKVAWCPTRMGLLATLTRDSNIIRLYDMQ
HTPTPIGDETEPTIIERSVQPSNSLIGSFAWHPTSQNRMVVVSAANRTMTDFTVFERISL
AWSSTTSLMWACGRHLYECAEEGGVGGEGTVEKDIATKMRQRAQSRYGHDTVQVWKNHLL
AGGDDPQLKSLWYTLFFMKQYTEDMEQKQQGNKQPLVYSGIKNIVKSSSGTTENRRCWSG
SDRQTDVPRFHSEERSLALRLCGWINRGPDINVEPFLRSLEGEGEWERAAAVALFNLDIR
RAIQILNKGASAERGDLNLNVVAMALSGYTDEKSSLWREMCSSLRLQLKNPYLCVMFAFL
TSEPGTYDGVLYESSVAVTDRVAFACMFLNDTQLPRYMEKLTSEMKEVGNLEGILLTGLT
KDGVDLMESYVDRTGDVQTASFCMLKGSPGEVVKDPRVQCWIENYRNLLDAWRFWHKRAE
FDIHRSKLDPSSKPLAQVFVSCNFCGKSISYSCSAMPHQGRGFSQYGVSGSPTKSKVTSC
PGCRKPLPRCALCLMNMGTPVSNCPGTGKSDEKVDLTRENKLAQFNNWFTWCHNCRHGGH
AGHILSWFRDHTECPVSTCTCKCMQLDTTGNLVPSDSH
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctcaaagccagacattctgtggtctccccaccacgccgaccgctatgtcatc
tgtgactcagagcttggactgtaccgcatcggacctgtggggagcggcgagaccaaagcc
ggagctctccccctctctgaggagaccgctgctaccctattagcgatcaactctgacacc
ccctacatgaaatgtgtggcctggtacccaaagcacgagcctgaatgtctgctagcagtt
ggacaggctaacggtagggtcgtcctcactagcctaggccagagccacaactccaagtgc
aaggagctaatggggaaagagtttgtgcccaagcatgcacgtcaatgcaacaccctagcc
tggaaccctttagacagcaactggctagccgccgggctggacaagcacagagcagacttc
tcagtgctcatatgggacattagcagtaagttctccccagaggctagtgtagccaccgaa
aagatccgtctctcgtcaggagacacagactctggcctagtggtgaccaaacccctgtat
gagctaggccagaacgatgcttgcctgtccctctgctggctgccccgtgaccagaagctg
ctcttggctggcatgcaccgcaacctggccatcttcgacctgcgcaacaccagccagaag
acctttgtcaataccaaggccatccagggtgtgacagtggacccccacttcccagaccgt
gtggcctccttctttgagggccaggtggccatctgggacctgcgcaagtttgagaagcca
gtgctcacgcttaccgagcagcccaagccgctcaccaaggtggcctggtgccccacgcgt
atgggcctgttggccacgctaacacgcgacagcaacatcatccgcctttacgacatgcag
cacacgcccacgcccatcggcgacgagacagagcccacaatcattgagcgcagcgtgcag
cccagcaacagcctcattggcagcttcgcctggcaccccacttcccagaaccgcatggtg
gtggtttcggcagccaatcgcaccatgaccgacttcactgtgttcgaacgcatctcttta
gcctggagctccaccacttcgctcatgtgggcctgcggcagacacctctatgagtgtgct
gaagaggggggcgtgggaggggagggtactgtagagaaggacatagccactaagatgagg
cagagggcccagtccaggtacggtcatgatacagtccaggtgtggaagaaccatttgctg
gccggaggggatgacccccagctcaagtccctgtggtacactctgttcttcatgaagcag
tacactgaagacatggagcagaaacagcaggggaacaaacagcccctggtctattcaggc
atcaagaacatagtcaagtccagctcaggcactacagagaaccgacggtgctggagcggc
tcagaccgccagacggacgtccccaggttccacagcgaggagcgcagccttgccctgcgt
ctgtgcggctggatcaaccgaggccctgacatcaacgtggagcccttcctgcgctccctg
gagggggagggggagtgggagcgtgcggccgccgtggccctcttcaacctggacatccgt
agagccatccagatcctcaacaagggagcctccgctgagagaggggacctgaacctaaac
gtggttgctatggcgttgtcaggttacacggacgagaagagttccctgtggagggagatg
tgcagctctctaaggctgcaactcaagaacccctacctgtgtgtcatgtttgccttcctc
accagtgagcctggcacatacgacggagtactgtatgagagtagtgtggctgtaacggac
cgagtggccttcgcatgcatgttcctaaacgacacacagctgcctcgctacatggagaag
ttgaccagtgagatgaaggaggtggggaacctggaggggatcctgctgacggggctgacc
aaagacggagtggacctgatggagagctacgtggaccggaccggagacgtccagaccgcc
agcttctgcatgctcaagggttccccaggggaggtggtgaaggacccgcgtgtccagtgc
tggatcgagaactaccgtaacctgctggacgcatggaggttctggcacaaacgggctgag
tttgacatccacaggagcaagctggaccccagctccaaaccactggcacaggtgtttgtg
agttgtaacttctgtgggaagtccatatcgtacagctgctcggccatgccccaccagggc
cgcggcttcagccagtacggggtcagcggctcgcccaccaagtcaaaggtcaccagctgc
cccggctgcaggaagcccctcccccgttgtgcgctctgcctcatgaacatgggcacgcct
gtgtccaactgcccaggcacggggaagtcagacgagaaggtggatctgaccagggagaac
aaactggcccagttcaacaactggttcacctggtgccacaactgccgccatggcggccat
gcaggtcacatactcagctggtttagggaccatacagagtgtccagtgtcgacctgcacc
tgtaagtgcatgcagctggacaccacaggaaacctggtgccttcagacagccactag
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