Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392884
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Entry
139392884 CDS
T10872
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like
KO
K23619
collagen type XXVIII alpha
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139392884
Peptidases and inhibitors [BR:
ocla01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
139392884
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GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
Motif
Other DBs
NCBI-GeneID:
139392884
NCBI-ProteinID:
XP_070997306
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Position
3:complement(30403412..30417998)
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AA seq
1188 aa
AA seq
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MLRKNNMGKGVALFLLLLALLHEAIGQRRRKGKYSVLRDGGNDMTTCSMEVAFILDSSES
AKTFLFEKQKSFVLHFSTRLTMLQVSGWTLKLRMAALQYSSSVSIEHSFTAWQDLDVFHS
RVSSMAYIGHGTYSTYAITNATQLFTQETKEDSVRVEVLMTDGADHPRNPDVIGAAADAK
ASGVKLFAIGLSDLARQSQKSAKLRAIASTPAQQFVHSLTDPQLEEKLLKELGAIALEVC
PQAKVCLCERGERGPPGNPGKKGDPGYEGPSGSKGSRGEPGVSGRPGSDGLEGSPGYKGD
KGEIGDCGTPGEKGDEGPGGPPGPRGPRGDQGVNGPPGDQGPEGQTGPKGDQGPIGASGP
AGDIGIGFPGPKGAKGIQGRPGTLGPIGIGEPGQPGPPGLAGAQGNQGAVGEGLPGPKGD
RGYEGPRGERGLTGVGVKGDKGNPGQLGSQGPVGMPGAGIQGEKGSQGPVGPPGPRGNPG
VGLMGQKGSQGFSGEPGIPGERGVGEPGSKGNPGSEGLPGIPGLSGEDGDIGQKGDIGLQ
GPRGPDGAPGKGVPGEKGDRGERGSRGQLGAVGPVGPMGAKGEPGSAGRAGTNGPPGRGL
PGIKGDPGAVGPPGHVGEPGIGITGPKGERGLPGPIGPPGLEGEGLPGTPGAPGVPGLTG
ETGPEGKGLPGPKGDRGTPGPTGPVGAPGVGLMGPKGSAGQIGAPGPQGVPGEGIQGPKG
ESGFQGITGPRGPPGQGIQGDKGDRGFVGERGRKGDRGETGERGAAGPLGRLGEKGEPGL
TREEVIKLVRSICGCGVKCRESPLEVVFVIDSSESVGPDNFNVVKDFVNALVDRASVSRE
ATHVGVVLYSHINMVVVSLHQQASRDQVKAAVRTMTYLGEGTFTGSAIHQANQVFRAARP
GVRKVAIVITDGQADERDTVRLEEAVKEANGSNIETFVIGVVNQSDPLYEEFKKELHLMA
SDPDREHVYLIDDFRTLPALESKLLSRICESDGGAQFSSIPSSRYSPGTPGQAGIVRETP
ERTDTDTPTFNGDFKKTQMVPGPPGESDRVFTPTGPETGDRDNSETYRVPSFDREPFKRL
PEFLLPSEVKNPTHGVVMTGPQAPTQMPLPVVKLPRLPPTSPPLPQDALIPDESCGQILD
PGPCRNYVVKWYYDTTANACAQFWFGGCQGNQNQFESEKSCKKTCVKV
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgttgagaaagaacaacatggggaaaggagtggctctgttccttctactgttggcactt
cttcacgaggctataggtcagagaagaagaaaaggaaaatacagtgtcctcagagatgga
ggaaatgacatgacaacatgttccatggaggtggccttcattctggacagttcggagagt
gccaagaccttcctgttcgagaagcagaagtcctttgttctgcatttcagcactcgtctc
accatgctccaggtgtctggatggaccctgaagctgcggatggctgctctgcagtacagc
agctccgtgtctatagagcacagcttcactgcctggcaggacctggatgtgttccacagc
agagtcagctccatggcctacataggccatggcacctactccacctacgccatcaccaac
gccacgcagctcttcacccaggagaccaaggaggacagtgtcagggtggaggtgctcatg
actgacggtgccgatcatccgaggaaccctgatgtgatcggagcagcggcagatgctaag
gctagtggcgtgaagctctttgctatagggttgtcggacctggcccgccagagccagaaa
agtgccaaacttcgggctatcgccagcacaccggcccagcagttcgtccacagtctcact
gacccccagctagaggagaagttactgaaagagttgggtgcaatagcgcttgaggtgtgt
ccacaggctaaagtgtgtttgtgtgaaagaggggagagaggccctcctggaaacccaggt
aaaaaaggagatccaggatatgaaggaccatctggttcaaaaggatcaaggggagaacct
ggagtcagtggccgaccaggaagtgacggtcttgagggcagtcctggttataaaggtgac
aagggggagataggagactgtggcacccctggggaaaaaggagatgaaggccctggagga
cctcctggcccacggggacccagaggagaccagggtgttaacggaccacccggggaccag
ggtccggagggccaaacaggacctaaaggggaccaaggacccatcggtgcatctggacca
gcaggtgacattggcattgggttcccaggtccaaagggggccaaaggaattcagggaaga
ccaggaacccttggtcccattggaattggagagccaggacagccaggacccccaggactt
gctggagcacagggtaaccagggagctgttggggaggggctccctggcccaaagggggat
cgaggctacgagggccccagaggtgagcgtggtctcactggtgttggggtcaaaggtgat
aagggaaatcctggacagcttggatcacaaggaccggtgggaatgccaggggcaggaatt
caaggagaaaaggggagccaagggccagttggccctccaggccccagagggaatccaggt
gtgggacttatgggccaaaagggaagccaaggcttctcaggtgagcctggaatcccaggg
gagagaggagtcggggagccaggatctaaaggaaacccaggatcggaggggttgcctggt
attccgggcctctctggagaggatggagacataggacagaagggtgacattgggttacag
gggcccaggggacctgatggggcacccggaaaaggtgtccctggagaaaagggggaccga
ggggagcggggctccaggggccagctaggggcagtagggcctgtggggccaatgggggcc
aagggtgaacccggaagtgctggacgagcaggtacaaatggaccacctgggcggggatta
cccggtatcaagggggaccctggtgcggtcggcccacccggacatgttggcgaaccagga
ataggaatcactggaccgaagggtgagagagggctaccagggcccattggtccacctggg
cttgaaggggaaggcctccctggaactccaggagcccctggagtaccaggactgacaggt
gagactggaccagaaggaaaaggtttacctggtcctaagggagaccggggaactccaggc
cccacaggaccagttggagcacctggagtcgggctaatgggtcccaaggggtcagcaggt
cagattggagcaccgggtccccagggagtgcctggagagggcattcaaggaccaaagggg
gagtcaggattccaggggatcacgggccccagggggcccccaggacagggtattcaaggg
gataagggagacagggggttcgtgggtgaacgaggcagaaagggggacaggggagagact
ggagagagaggagctgctggacctttgggcagactgggagaaaaaggggaacctggccta
acaagagaggaggtcatcaaactggtcagatctatatgtggttgtggggtgaagtgccgt
gagagcccactggaggtggtctttgtgattgacagctcagaaagcgttggccccgacaac
ttcaacgtggtcaaggactttgtgaacgctctggtcgaccgcgcctccgtgagccgggag
gccactcacgtcggggtggtcctctacagccacatcaacatggtggtggtcagtctgcac
cagcaggccagccgggaccaggtgaaggcggcggtccgcactatgacctacctgggcgaa
ggcacctttacgggcagcgccatccatcaggccaaccaggtgttccgggcggccaggccc
ggggtgaggaaagtggccatagtgatcacagatggacaggcggacgagagggacactgtg
aggctggaggaggcggtgaaagaggccaatggcagtaacattgagacgtttgtcatcggg
gtggtgaaccagagtgatccgctgtacgaggagtttaagaaagagctccacctcatggcc
tctgacccagacagggaacacgtgtatctgattgatgacttcaggacacttcctgccctt
gagagcaagctgctgagtcggatctgtgagagtgatggtggggcccagttcagctccatc
cccagctccagatactcccccggaacccctggacaagctgggattgtcagggaaacccca
gagaggactgataccgacacgcccactttcaatggagacttcaagaaaacacagatggtg
ccaggtccaccaggagagtcagacagagtctttaccccaacgggccccgagaccggggac
cgagataactcggagacctacagggtcccatcctttgacagggaacccttcaagcgccta
ccagagttccttcttccgtcagaggtgaagaaccccacccacggtgtggtcatgactggc
cctcaggcccccacccagatgccccttcccgtagtaaagctacccaggctccccccaacc
tctccacctctgccccaggatgctttaataccagatgagagttgtggacagattctggac
cccgggccttgcaggaattatgttgtgaagtggtactatgacactacggctaacgcctgt
gcccagttctggtttggaggttgtcagggaaaccaaaaccagtttgagtcggagaagagc
tgcaaaaaaacctgtgtgaaggtctaa
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