Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392999
Help
Entry
139392999 CDS
T10872
Name
(RefSeq) histidine ammonia-lyase-like
KO
K01745
histidine ammonia-lyase [EC:
4.3.1.3
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00340
Histidine metabolism
ocla01100
Metabolic pathways
ocla04382
Cornified envelope formation
Module
ocla_M00045
Histidine degradation, histidine => N-formiminoglutamate => glutamate
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09105 Amino acid metabolism
00340 Histidine metabolism
139392999
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139392999
Enzymes [BR:
ocla01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.3 histidine ammonia-lyase
139392999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_aromatic
Motif
Other DBs
NCBI-GeneID:
139392999
NCBI-ProteinID:
XP_070997416
LinkDB
All DBs
Position
33:complement(16889947..16894588)
Genome browser
AA seq
553 aa
AA seq
DB search
MDVQEHNDFVNVGKEETAIGKRQSLDPNQYLSLDGNSLTIADLVRLGKGLFNIKLTPEAE
GKINEAREVIETIIKENRVVYGVNTGFGKFAHMLIPKDKLMELQMNLIRSHSAGVGTPLS
VERTRMLLALRINVLAKGYSGVSMETVQAMVKAFNASCLSWVPEKGTVGASGDLAPLAHL
TLGLMGEGRMWSPQRGWDHAKTVLECHGLTPLVLKPKEGIGLINGTQMMSSLAAEAVERA
VGVARQADIIAALSLEALRGTTKAFHSDVHAVRPHPGQIEVALRLRSLLHSDVFPSQISD
SHRTCDRVQDAYTLRCIPQVHGVANDTIAFVKSILTTELNSATDNPLVFAERGETISGGN
FHGEYPAKALDYLAIGVHELASMSERRTERLVNPSLSELPAFLVQDGGLNSGFMIAHCTA
AALVSESKALCHPSSVDSLSTSAATEDHVSMGGWAARKALRVVEHVEQVLAIELLAACQA
LEFLRPLKSTTPLEKVRELVRTVVRPWDHDRQMSPDIEAAHTLLREEKVWEAARPYMDQY
RDRLGLKPLPLDD
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgcaggagcacaatgactttgtcaatgttggtaaggaagaaactgccattggg
aaacgccagtctctcgatcccaaccagtacctctctctggatgggaacagtctgaccata
gctgatctggtccgtttggggaaaggcctgttcaacatcaagctgacccccgaggctgaa
gggaaaatcaatgaagccagagaagtgatagaaaccatcataaaagaaaaccgagttgtc
tatggcgtcaacacagggtttgggaaatttgcccatatgctcattccaaaggataagctc
atggaactacagatgaatctgattcgatctcatagtgctggagtgggcaccccattgagt
gtagagaggacccgtatgctactggctctgaggattaacgttctggccaaagggtacagt
ggcgtctccatggaaacagtccaggctatggtcaaagccttcaatgcctcctgcctgtcg
tgggtgccagagaagggaacggtaggcgctagtggagacctggcccccctggcccacctc
accctgggccttatgggagagggcaggatgtggtcgcctcaacgcggctgggaccatgcc
aaaacagtactggaatgtcatggactcacacctttggttctgaagcctaaagagggcatc
ggtctgatcaacgggactcagatgatgtcatctctggcggcggaggcagtggagcgagct
gtgggcgtggccaggcaggctgacatcatcgctgccctcagtctggaggccctgaggggc
accaccaaggccttccacagcgacgtccatgccgtgaggccacaccctggtcagatagag
gtggctctgagactccgctctctactccactcggacgtcttcccctcccagatctctgat
agtcataggacatgtgaccgtgtccaggatgcatacaccctccgctgtatcccacaggtt
catggggtagctaacgacaccatagcctttgttaagagcatcctcaccactgagctcaac
agtgccactgacaaccctctggtttttgcagagcgaggtgagactatctctgggggtaat
ttccatggagaatacccagccaaggctctagactacctggccatcggggtccatgagctg
gccagtatgagtgagaggaggacagagaggctggtcaacccgtccctcagtgagctgcct
gccttcctggtccaagatggaggcctcaactctggtttcatgattgcacactgcactgct
gctgcccttgtatctgagagcaaggcgttgtgccacccgtcctccgtggactccctgtcc
accagcgcagccactgaagaccacgtctccatggggggctgggccgctaggaaggccctg
agggtggtggaacacgtagagcaagttctggccatagagctgctcgctgcctgtcaagcc
ctggagtttctccgcccgctcaagtccactacccctctggagaaagtccgtgagctagtg
cgtactgttgtcaggccttgggatcatgaccgtcaaatgagtcctgacattgaggctgct
cacacgctcctcagggaggaaaaggtgtgggaggcggctcggccatacatggaccaatac
cgagacaggctcggactgaaaccactcccactggatgactag
DBGET
integrated database retrieval system
